Pairwise Alignments

Query, 329 a.a., putative Peptidase from Pseudomonas putida KT2440

Subject, 618 a.a., protease IV (signal peptide peptidase) (NCBI) from Escherichia coli BW25113

 Score = 86.7 bits (213), Expect = 1e-21
 Identities = 73/258 (28%), Positives = 121/258 (46%), Gaps = 20/258 (7%)

Query: 68  KAASRSASHTALVEVRGVIADQEAASA----DNIVKSLREAFKDDKTKAVVMRINSPGGS 123
           K  + +     +V   G I D E        D     +R+A  D K KA+V+R+NSPGGS
Sbjct: 319 KTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGS 378

Query: 124 PVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTA 183
              +  +  E+   RA    +     +  + ASG Y+I++ A+ I A+ ++L GSIG+  
Sbjct: 379 VTASEVIRAELAAARAAGKPV--VVSMGGMAASGGYWISTPANYIVANPSTLTGSIGI-- 434

Query: 184 AGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPEK---PEETRFWQGVLDTTHRQFIAMV 240
             +G + T+E        +T G   + L   S  +   PE     Q  ++  +++FI +V
Sbjct: 435 --FGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQLMMQLSIENGYKRFITLV 492

Query: 241 KQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGLG---SASYVAREIVGEKEL-VDFT 296
              R      ++  ++  G +W+G+ AKA GLVD LG    A   A E+   K+  +++ 
Sbjct: 493 ADAR--HSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKVKQWHLEYY 550

Query: 297 VQESP-FDRFSKRVGASV 313
           V E   FD+    +  SV
Sbjct: 551 VDEPTFFDKVMDNMSGSV 568



 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 65/257 (25%), Positives = 108/257 (42%), Gaps = 39/257 (15%)

Query: 65  DMDKAASRSASHTALVEVRGVIADQE--------------AASAD--------NIVKSLR 102
           D  + ASR A    L+++ GVI D+                AS+D        +IV ++R
Sbjct: 49  DSKETASRGA---LLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIR 105

Query: 103 EAFKDDKTKAVVMRI-NSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYI 161
           +A  D     +VM + N  GG      Y+   ++  R     +  YAV  +  + G YY+
Sbjct: 106 QAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPV--YAV-GENYSQGQYYL 162

Query: 162 ASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPF-----SP 216
           AS A++I+     +V   G    G  +   ++KL V    +  G +K+ ++PF     SP
Sbjct: 163 ASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSP 222

Query: 217 EKPEETRFWQGVLDTTHRQFIAMVKQGRGERLKDKEHPELFSGLIWSG----EQAKALGL 272
              E    W G L   +   +A  +Q   E++       L  GL  +G    + A    L
Sbjct: 223 AAREADSRWIGELWQNYLNTVAANRQIPAEQVFPGAQ-GLLEGLTKTGGDTAKYALENKL 281

Query: 273 VDGLGSASYVAREIVGE 289
           VD L S++ + + +  E
Sbjct: 282 VDALASSAEIEKALTKE 298