Pairwise Alignments

Query, 329 a.a., putative Peptidase from Pseudomonas putida KT2440

Subject, 618 a.a., signal peptide peptidase SppA from Escherichia coli ECRC99

 Score = 88.2 bits (217), Expect = 5e-22
 Identities = 73/258 (28%), Positives = 122/258 (47%), Gaps = 20/258 (7%)

Query: 68  KAASRSASHTALVEVRGVIADQEAASA----DNIVKSLREAFKDDKTKAVVMRINSPGGS 123
           K  + +     +V   G I D E        D     +R+A  D K KA+V+R+NSPGGS
Sbjct: 319 KTPADTGDSIGVVFANGAIMDGEETQGNVGGDTTAAQIRDARLDPKVKAIVLRVNSPGGS 378

Query: 124 PVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYIASAADEIYADKASLVGSIGVTA 183
              +  +  E+   RA    +     +  + ASG Y+I++ A+ I A+ ++L GSIG+  
Sbjct: 379 VTASEVIRAELAAARAAGKPV--VVSMGGMAASGGYWISTPANYIVANPSTLTGSIGI-- 434

Query: 184 AGYGFVGTMEKLGVERRAYTSGEHKAFLDPFSPEK---PEETRFWQGVLDTTHRQFIAMV 240
             +G + T+E        +T G   + L   S  +   PE  +  Q  ++  +++FI +V
Sbjct: 435 --FGVITTVENSLDSIGVHTDGVSTSPLADVSITRALPPEAQQMMQLSIENGYKRFITLV 492

Query: 241 KQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGLG---SASYVAREIVGEKEL-VDFT 296
              R      ++  ++  G +W+G+ AKA GLVD LG    A   A E+   K+  +++ 
Sbjct: 493 ADAR--HSTPEQIDKIAQGHVWTGQDAKANGLVDSLGDFDDAVAKAAELAKAKQWHLEYY 550

Query: 297 VQESP-FDRFSKRVGASV 313
           V E   FD+    +  SV
Sbjct: 551 VDEPTFFDKVMDNMSGSV 568



 Score = 55.5 bits (132), Expect = 4e-12
 Identities = 68/280 (24%), Positives = 114/280 (40%), Gaps = 52/280 (18%)

Query: 65  DMDKAASRSASHTALVEVRGVIADQE--------------AASAD--------NIVKSLR 102
           D  + ASR A    L+++ GVI D+                AS+D        +IV ++R
Sbjct: 49  DSKETASRGA---LLLDISGVIVDKPDSSQRFSKLSRQLLGASSDRLQENSLFDIVNTIR 105

Query: 103 EAFKDDKTKAVVMRI-NSPGGSPVQAGYVYDEIRRLRAEYPAIKLYAVIADLGASGAYYI 161
           +A  D     +VM + N  GG      Y+   ++  R     +  YAV  +  + G YY+
Sbjct: 106 QAKDDRNITGIVMDLKNFAGGDQPSMQYIGKALKEFRDSGKPV--YAV-GENYSQGQYYL 162

Query: 162 ASAADEIYADKASLVGSIGVTAAGYGFVGTMEKLGVERRAYTSGEHKAFLDPF-----SP 216
           AS A++I+     +V   G    G  +   ++KL V    +  G +K+ ++PF     SP
Sbjct: 163 ASFANKIWLSPQGVVDLHGFATNGLYYKSLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSP 222

Query: 217 EKPEETRFWQGVLDTTHRQFIAMVKQGRGERLKDKEHPELFSGLIWSGEQAKALGLVDGL 276
              E    W G L   +   +A  +Q   +        ++F G         A GL++GL
Sbjct: 223 AAREADSRWIGELWQNYLNTVAANRQIPAQ--------QVFPG---------AQGLLEGL 265

Query: 277 GSASYVAREIVGEKELVDFTVQESPFDR-FSKRVGASVAE 315
                   +   E +LVD     +  ++  +K  G S A+
Sbjct: 266 TKTGGDTAKYALENKLVDALASSAEIEKALTKEFGWSKAD 305