Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 316 a.a., LSU rRNA pseudouridine(1911/1915/1917) synthase (EC 5.4.99.23) from Sphingobium sp. HT1-2

 Score =  124 bits (312), Expect = 2e-33
 Identities = 94/292 (32%), Positives = 139/292 (47%), Gaps = 22/292 (7%)

Query: 10  GVQLIE--VAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPEYKIQAGD 67
           GV +IE  +    AG R+D  L   L  + +  +  ++ +G++      + P  K+  G 
Sbjct: 4   GVSIIETTIGEAQAGLRLDRALAELLPDLSRERIKALIVEGQIVSGGRSLNPSMKVAVGQ 63

Query: 68  IVRVPPVRLPERDEPAPVA-QGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSGLSFGVI 126
              +          PAPVA   + Q +   IV+ED  LIV++KPAG+ VH  +G   G +
Sbjct: 64  DYSITL--------PAPVALDAVAQDIPLDIVHEDADLIVVDKPAGLVVHPAAGNLDGTL 115

Query: 127 EALRQLRPDAK--------ELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRY 178
                   D +           +VHR+D+DTSGLL++AK       L    +   +D+ Y
Sbjct: 116 VNALLHHCDGQLSGIGGVARPGIVHRIDKDTSGLLVVAKSDKAHEGLARQFKDHSIDRLY 175

Query: 179 MALVRGHWPTSKKQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEAR 238
            A+V G        V+A + +S+    +  V     GK A+T +RV+ R    A +VE R
Sbjct: 176 AAIVYGIPAPGSGTVDAWIGRSDADRKKMAVHREGRGKHAVTHYRVMERLRG-AAMVECR 234

Query: 239 PITGRTHQIRVHTLHAGHMIAGDSKYGDE--DFSREIRELGGKRLFLHAYAL 288
             TGRTHQ+RVH  H GH + GD  YG +   F   +  LG KR  LHA  L
Sbjct: 235 LETGRTHQVRVHMAHLGHPLIGDPVYGRDRKGFKSILETLGFKRQALHAKRL 286