Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 320 a.a., 23S rRNA pseudouridine(1911,1915,1917) synthase from Pseudomonas putida KT2440

 Score =  117 bits (294), Expect = 3e-31
 Identities = 95/310 (30%), Positives = 151/310 (48%), Gaps = 29/310 (9%)

Query: 15  EVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPEYKIQAGDIVRVPPV 74
           EV  EL GQR+D           ++ +   +++G + V+   V+P   +  G        
Sbjct: 10  EVPSELGGQRLDQVAAQLFAEYSRSRLTSWIKEGRLTVDGAVVRPRDLVHGGS------- 62

Query: 75  RLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSGLSFG-VIEALRQLR 133
           +L    E     + + + +E  IVYED  ++V+NKPAG+ VH  +G + G ++ AL    
Sbjct: 63  QLALEAEQEAQGEWIAEDIELDIVYEDDHILVINKPAGLVVHPAAGHASGTLLNALLHHV 122

Query: 134 PDAKELE---LVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMALVRGHWPTSK 190
           PD   +    +VHRLD+DT+GL+++AK       L   ++   V + Y  +V G   T+ 
Sbjct: 123 PDIVNVPRAGIVHRLDKDTTGLMVVAKTLQAQTKLVEQMQARKVSRIYECIVIGV-VTAG 181

Query: 191 KQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARPITGRTHQIRVH 250
            +++AP+ +       + + V + GK A++ +RVL+RF    T V  +  TGRTHQIRVH
Sbjct: 182 GKIDAPIGRHG--GMRQRMAVTDGGKPAVSHYRVLKRFRSH-THVRVKLETGRTHQIRVH 238

Query: 251 TLHAGHMIAGDSKYG---------DEDFSREIRELGGKRLFLHAYALTVPLPDGGE-LKL 300
             H G  + GD  YG                ++     R  LHA  L +  P  GE +K 
Sbjct: 239 MAHVGFPLVGDQTYGGRFRIPPAASPTMVEAVKTF--PRQALHARFLALAHPITGEVMKW 296

Query: 301 EAPV--DEVW 308
           E+P+  D VW
Sbjct: 297 ESPLPDDFVW 306