Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 325 a.a., 23S rRNA pseudouridine(1911/1915/1917) synthase RluD from Dickeya dianthicola ME23

 Score =  113 bits (282), Expect = 7e-30
 Identities = 98/317 (30%), Positives = 149/317 (47%), Gaps = 28/317 (8%)

Query: 16  VAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRV-KPEYKIQAGDIVRVPPV 74
           VA    GQR+D  L        ++ +   + +  V++N   V KP+ K+  G+ V +   
Sbjct: 11  VAESQLGQRLDQALAELFPDYSRSRIKTWILEQRVQINGNMVDKPKEKVLGGESVAIDA- 69

Query: 75  RLPERDEPAPVAQGLLQRLEAAIVYEDKALIVMNKPAGIAVHGGSGLSFG-VIEALRQLR 133
            L E D     A+   Q +   IVYED  ++V+NKP  + VH G+G   G V+ AL    
Sbjct: 70  -LIEED-----ARWEAQPISLDIVYEDGDILVINKPRNLVVHPGAGNPDGTVLNALLHHY 123

Query: 134 P---DAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYMALVRGHWPTSK 190
           P   D     +VHRLD+DT+GL+++AK       L  +L+   + + Y A+  G   T+ 
Sbjct: 124 PEIVDVPRAGIVHRLDKDTTGLMVVAKTVPAQTRLVESLQAREITREYEAVAIGTM-TAG 182

Query: 191 KQVNAPLLKSNLRSGERMVEVNEEGKEALTLFRVLRRFGDFATIVEARPITGRTHQIRVH 250
             V  P+ + + +     + V+  GK A+T +R++  F    T +  R  TGRTHQIRVH
Sbjct: 183 GTVEEPIARHSTKRTH--MAVHPMGKPAVTHYRIMEHFRAH-TRLRLRLETGRTHQIRVH 239

Query: 251 TLHAGHMIAGDSKYG---------DEDFSREIRELGGKRLFLHAYALTVPLPDGG-ELKL 300
             H  H + GD  YG          E F   +R     R  LHA  L +  P  G E++ 
Sbjct: 240 MAHINHPLVGDPLYGGRPRLPKGASETFIETLRNF--DRQALHATMLRLYHPISGIEMEW 297

Query: 301 EAPVDEVWAKTVERLSA 317
            AP+ +     +  L A
Sbjct: 298 HAPLPQDMVDLIAALKA 314