Pairwise Alignments

Query, 318 a.a., ribosomal large subunit pseudouridine synthase C from Pseudomonas putida KT2440

Subject, 329 a.a., ribosomal large subunit pseudouridine synthase C from Agrobacterium fabrum C58

 Score =  192 bits (489), Expect = 7e-54
 Identities = 118/308 (38%), Positives = 178/308 (57%), Gaps = 14/308 (4%)

Query: 9   SGVQLIEVAPELAGQRIDNFLITALKGVPKTLVYRILRKGEVRVNKGRVKPEYKIQAGDI 68
           +G++ I+V  + AG R+D +      G+    + ++LR G+VRV+ GRVK + ++Q G +
Sbjct: 2   AGIEHIKVEADEAGMRLDRWFKIHYPGLGFGQLQKLLRSGQVRVDGGRVKTDARVQPGQM 61

Query: 69  VRVPPVRLPERDEPAPVAQGLLQR------LEAAIVYEDKALIVMNKPAGIAVHGGSGLS 122
           VRVPPV    + +  P+    L+       L   +++ED  ++V NKPAGIAV GGSG++
Sbjct: 62  VRVPPVDSDMKTKTGPIGSKDLKHSADGELLARMLLHEDDKVLVFNKPAGIAVQGGSGVN 121

Query: 123 F---GVIEALRQLRPDAKELELVHRLDRDTSGLLMIAKKRSMLRHLHAALRGDGVDKRYM 179
               G++EA     P  ++  LVHRLDRDTSG+L++A+ R   + L AA R     K Y 
Sbjct: 122 RHIDGLLEAWTS--PKGEKPRLVHRLDRDTSGVLVVARTRGAAQKLTAAFRERDTKKTYW 179

Query: 180 ALVRGHWPTSKKQVNAPLLKSNLRSGERM--VEVNEEGKE-ALTLFRVLRRFGDFATIVE 236
           ALVRG     + +++  L+K     G+RM   +  EEG + A++ +RV+         +E
Sbjct: 180 ALVRGVPRKHQDKISTWLVKEQTPDGDRMRIAKHGEEGADHAISYYRVIDTAAQNLAWLE 239

Query: 237 ARPITGRTHQIRVHTLHAGHMIAGDSKYGDEDFSREIRELGGKRLFLHAYALTVPLPDGG 296
             P TGRTHQ+RVH LH GH I GD KY  +D + +      KRL LHA  + +P P+GG
Sbjct: 240 MEPYTGRTHQLRVHALHMGHPIIGDPKYYIDDPNWDFPGGVQKRLHLHARHIDIPHPNGG 299

Query: 297 ELKLEAPV 304
            L++ AP+
Sbjct: 300 RLRVSAPL 307