Pairwise Alignments

Query, 259 a.a., Type 1 pili chaperone protein FimC from Pseudomonas putida KT2440

Subject, 248 a.a., fimbria/pilus periplasmic chaperone from Erwinia tracheiphila SCR3

 Score =  141 bits (356), Expect = 1e-38
 Identities = 80/222 (36%), Positives = 129/222 (58%), Gaps = 11/222 (4%)

Query: 31  LMLTLSVNSHAALTLNNTRLVFNGDKRSTSVVVRNPSKSIYAVQAWI---NTDADDNTTS 87
           LML L    +AA+T++ TR++F G ++  +V   N   +   VQ W+   N + D NT  
Sbjct: 11  LMLCLVAQGNAAMTISGTRIIFPGSEKEVNVRTNNRGSNPALVQVWVDDGNANGDVNTMK 70

Query: 88  VPFATSPPLFKINPNSEQLLKIIGLPNTLPHDRESLFFFNVQEIPQV--SSDTGNQLNIA 145
           +PF T+PP++++ P   Q +++I     LP DRESLF+FN+ E+P V    D  ++L +A
Sbjct: 71  IPFMTTPPVYRVEPGKGQSVRLIYNGMALPQDRESLFWFNLLEVPPVVKGMDNVDRLELA 130

Query: 146 LRTRIKLFYRPPTLKGTPTDHLNSLTFS-LSVRNGVEQLVVKNPSPFHITFNRLEVKGQG 204
            RTRIK+FYRP +L G+ T+ ++ L +  LS   GV    V NP+P++++F+ +  +  G
Sbjct: 131 FRTRIKIFYRPKSLSGSGTNEVDKLKWEILSNNKGVR---VTNPTPYYLSFDSVSAEIGG 187

Query: 205 QQHTLKNTAMLEPFGEKTYPLTGITRASSL-QARFSIVNDYG 245
           +   L    M++PFG   + L      S L   +F ++NDYG
Sbjct: 188 KSVVL-TPDMIKPFGSSDFLLENKGIISGLTSVKFKLINDYG 228