Pairwise Alignments

Query, 259 a.a., Type 1 pili chaperone protein FimC from Pseudomonas putida KT2440

Subject, 252 a.a., fimbrial protein from Escherichia coli ECRC101

 Score =  110 bits (275), Expect = 3e-29
 Identities = 78/225 (34%), Positives = 118/225 (52%), Gaps = 20/225 (8%)

Query: 28  LTLLMLTLSVNSHAALTLNNTRLVFNGDKRSTSVVVRNPS-KSIYAVQAWINTDADDNTT 86
           L LL+   S++  A++T + TRL+FN   +S SV +RN   K  Y  Q+W+  D   N  
Sbjct: 15  LALLITAASLSVQASVTPDRTRLIFNESDKSISVTLRNNDPKMPYLAQSWME-DGQGNRI 73

Query: 87  SVPFATSPPLFKINPNSEQLLKIIGLP--NTLPHDRESLFFFNVQEIPQVSSDTGNQLNI 144
           S P    PP+ +I+      +K+ G+P  N LP DRES+F+FNV+EIP   S+  N L I
Sbjct: 74  SSPLTVLPPVQRIDSMMNGQVKVQGMPDINKLPADRESVFYFNVREIPP-KSNKPNTLQI 132

Query: 145 ALRTRIKLFYRPPTLKG----TPTDHLNSLTFSLSVRNGVEQLVVKNPSPFHITFNRLEV 200
           AL+TRIKLF+RP  L+      P  H  +LT S       ++  V NP+P+ +  +    
Sbjct: 133 ALQTRIKLFWRPKALENVSMKNPWQHKVTLTLS------GQEFTVNNPTPYFVVISNASA 186

Query: 201 KGQGQQHTLKNTAMLEPFGEKTYPLTGITRASSLQARFSIVNDYG 245
           +  G      +  ++ P  + + PL    +  S+    + VNDYG
Sbjct: 187 QKNGNPAAGFSPMVISP--KTSVPLK--VKMDSVPV-LTYVNDYG 226