Pairwise Alignments

Query, 831 a.a., Type 1 pili subunit FimD from Pseudomonas putida KT2440

Subject, 869 a.a., putative outer membrane export usher protein from Escherichia coli BL21

 Score =  395 bits (1015), Expect = e-114
 Identities = 280/851 (32%), Positives = 423/851 (49%), Gaps = 80/851 (9%)

Query: 20  CLLG----SSTLLSAPYSQADSGFQSGFLRQVPGQPQAASAWSLSMLTSDQGLAPGRYRV 75
           CL G    S  +L +  S A+S F   FL +        S   LS          G YRV
Sbjct: 16  CLAGICYSSLAILPSFLSYAESYFNPAFLLE-----NGTSVADLSRFERGNHQPAGVYRV 70

Query: 76  EVQVNLEPAGQHELDFQPGPD------GELQPCLPARLLGEWGMRLDALAN-PEDQASAC 128
           ++  N E  G  ++ F+   +      G L PC    LL   G+   A     + Q + C
Sbjct: 71  DLWRNDEFIGSQDIVFESTTENTGDKSGGLMPCFNQVLLERIGLNSSAFPELAQQQNNKC 130

Query: 129 LDLLTVVPGAQIVFTPTELHLAISIPQISMRRNTANQVDPSRWDSGINAAFINYQASTLN 188
           ++LL  VP A I F    + L I+IPQI++  +    + P  WD GI A  +NY  +   
Sbjct: 131 INLLKAVPDATINFDFAAMRLNITIPQIALLSSAHGYIPPEEWDEGIPALLLNYNFTGNR 190

Query: 189 GRNRSSGRYTSNDLYLNSGINLGEWRLRSTQSW---RQGSQGKTEWTRAQTYAQRDIPGT 245
           G    S  Y  ++L   SGIN+G WRLR+  SW   R       +W    T+ QR I   
Sbjct: 191 GNGNDS--YFFSEL---SGINIGPWRLRNNGSWNYFRGNGYHSEQWNNIGTWVQRAIIPL 245

Query: 246 LANLTIGETFTDREVFRSVPISGVRVASDMGMLADNQRGYAPIIRGVAQSRAKVEIWQHG 305
            + L +G+  T  ++F  V   GVR+ S   M  D+Q+G+AP + G+A++ A++ I Q+G
Sbjct: 246 KSELVMGDGNTGSDIFDGVGFRGVRLYSSDNMYPDSQQGFAPTVHGIARTAAQLTIRQNG 305

Query: 306 YPIYSTYVSAGPYAIDDLS-TAGSGELEVVVTEADGQVRRFIQPYSTMSNLLRPGVWRYS 364
           + IY +YVS G + I DL  T+ +G+L+V + E DG  + +  PYST+  L R G +++ 
Sbjct: 306 FIIYQSYVSPGAFEITDLHPTSSNGDLDVTIDERDGNQQNYTIPYSTVPILQREGRFKFD 365

Query: 365 ATVGRYNP-SSDLETPLLWQGTLAVGSYWDTTVYGGLMASEFYRAGNLGFSKDLGHLGAV 423
            T G +   +S   +P  +QGT   G   + T YGG   S  Y A  LG  ++LG+ GAV
Sbjct: 366 LTAGDFRSGNSQQSSPFFFQGTALGGLPQEFTAYGGTQLSANYTAFLLGLGRNLGNWGAV 425

Query: 424 AFDVTQASSAI--DNAHEREVQGSSYALKYAKAFTT-QTNLRFAGYRYSTQGYRDFDEVV 480
           + DVT A S +  D+ HE    G S    YAK+  T  TN +  GYRYSTQG+   D+V 
Sbjct: 426 SLDVTHARSQLADDSRHE----GDSIRFLYAKSMNTFGTNFQLMGYRYSTQGFYTLDDVA 481

Query: 481 RQRSQ----DTTFSG----------------SRRSRLEASVHQSLGRTSSLTLTLSQQDY 520
            +R +    D  + G                SR+ RL+ ++ QSL    SL ++ + Q Y
Sbjct: 482 YRRMEGYEYDYDYDGEHRDEPIIVNYHNLRFSRKDRLQLNISQSLNDFGSLYISGTHQKY 541

Query: 521 WRSNATQRQYQFNFNTQHRGVGYNLFASQSLTDRYG---NDRQFGLSVTVPLHFG----- 572
           W ++ +   YQ  + +   G+ Y+L  S S  +  G   N+R  GL+V+VP +       
Sbjct: 542 WNTSDSDTWYQVGYTSSWVGISYSL--SFSWNESVGIPDNERIVGLNVSVPFNVLTKRRY 599

Query: 573 ------HRANATFDLQHNANGYSQRATLSGSDSA----RALSYSTSLSRDEHARKTAALS 622
                  RA A+F+   N+NG  Q + L+G          LSY  S     +   T + +
Sbjct: 600 TRENALDRAYASFNANRNSNG--QNSWLAGVGGTLLEGHNLSYHVSQGDTSNNGYTGSAT 657

Query: 623 LGHQAPYASVSAGYTEADNYRSLSLNASGAVLLHADGLEFGRYLGDTAALIEVPGVANVG 682
              QA Y ++  GY    +   ++   SG V+ H +G+   + LGDT  LI+ PG   V 
Sbjct: 658 ANWQAAYGTLGVGYNYDRDQHDVNWQLSGGVVGHENGITLSQPLGDTNVLIKAPGAGGVR 717

Query: 683 LQNATGTRTNSRGYALLPYLQPYRTNSVVLETDRLDPDVEIDNGIAQVVPRQGAVVKHRF 742
           ++N TG  T+ RGYA++PY   YR N + L+T+ +   ++++  I+ VVP QGA+V+  F
Sbjct: 718 IENQTGILTDWRGYAVMPYATVYRYNRIALDTNTMGNSIDVEKNISSVVPTQGALVRANF 777

Query: 743 EARRVSRLVLTLHDTQ-GQPLPFGAQVLAENGTQL-GMVGQAGLVMLTNPSQEQPLQVSW 800
           + R   R ++T+  TQ G+P+PFG+ ++ EN T +  MVG  G V L+       L V W
Sbjct: 778 DTRIGVRALITV--TQGGKPVPFGS-LVRENSTGITSMVGDDGQVYLSGAPLSGELLVQW 834

Query: 801 GEQPNAGCQVH 811
           G+  N+ C  H
Sbjct: 835 GDGANSRCIAH 845