Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 626 a.a., DEAD/DEAH box helicase from Pseudomonas simiae WCS417

 Score =  295 bits (754), Expect = 5e-84
 Identities = 160/376 (42%), Positives = 234/376 (62%), Gaps = 11/376 (2%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           FA+L L+  +V A+ A GY EP+ +QQ++IP +L G D++  AQTGTGKT  FALPIL +
Sbjct: 3   FASLGLSEALVRAIEAAGYTEPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62

Query: 68  I------DVSKR----EPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGP 117
           +      D S+R    +P+ L+L PTRELA QV  +F+ YA+ +  V+   ++GG  M P
Sbjct: 63  LFPNGHPDKSQRHGPRQPRVLVLTPTRELAAQVHDSFKLYARDLKFVSA-CIFGGVGMNP 121

Query: 118 QLRAIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAI 177
           Q++A+  G  ++VA PGRL D   +    LS V+ LVLDEAD ML +GF+ D++ +   +
Sbjct: 122 QVQAMSRGVDVLVACPGRLLDLCGQGSVDLSHVEILVLDEADRMLDMGFVHDVKKVLARL 181

Query: 178 PATRQTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVL 237
           PA RQ +LFSAT    I ++A + L  P+ +++     TV  IEQ    + A  K   + 
Sbjct: 182 PAKRQNLLFSATFSQDITALAGKLLHNPERIEVTPPNTTVERIEQRVFRLAASHKRALLA 241

Query: 238 RLLEVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLD 297
            L+    ++ ++ F RTK     LA  L+  G  A A++G+ +QN R + +   K G + 
Sbjct: 242 HLITAGAWEQVLVFTRTKHGANRLAEYLDKHGLTAVAIHGNKSQNARTKALADFKAGSVR 301

Query: 298 IVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRML 357
           I+VATD+AARGLD+ ++ HV N ++P   E YVHRIGRTGRAGR G A+ LV P E ++L
Sbjct: 302 ILVATDIAARGLDIDQLPHVVNFELPNVDEDYVHRIGRTGRAGRSGEAISLVAPDEEKLL 361

Query: 358 QVIERVTGQKVAEARL 373
           + IER+T QK+A+  L
Sbjct: 362 KSIERMTKQKIADGDL 377