Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 489 a.a., ATP-dependent RNA helicase Bcep18194_A5658 from Variovorax sp. SCN45

 Score =  279 bits (713), Expect = 2e-79
 Identities = 151/373 (40%), Positives = 226/373 (60%), Gaps = 10/373 (2%)

Query: 5   TGGFAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPI 64
           T  F+ L L   +  AV   GYE  + IQ+Q+IP++L+G D++G AQTGTGKTAAF+LP+
Sbjct: 2   TSSFSNLSLAEPLARAVAEMGYETMTPIQEQAIPVVLSGQDVMGAAQTGTGKTAAFSLPL 61

Query: 65  LNKI--------DVSKREPQALILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMG 116
           L ++          ++   +AL+L PTRELA QVA   + YAK    +    V+GG  M 
Sbjct: 62  LQRMLKHENASTSPARHPVRALVLLPTRELADQVAQQIKLYAKYT-NLRSTVVFGGIDMK 120

Query: 117 PQLRAIRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDA 176
           PQ   ++ G +++VATPGRL DH+     VL+ V+Y+VLDEAD ML +GF+ DL+ I   
Sbjct: 121 PQTLELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY 180

Query: 177 IPATRQTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAV 236
           +P  R T+LFSAT    I+ +A  +L+ P  +++    +T + +EQ    V  D K  A+
Sbjct: 181 LPKQRTTLLFSATFSPEIKRLASSYLQNPITIEVARPNETASTVEQHFYSVSDDDKRRAL 240

Query: 237 LRLLEVEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRL 296
            +++          FV +K     LA +LE  G +  AL+GD +Q++R + + S K G +
Sbjct: 241 KQIVRQRGITQAFVFVNSKLGCARLARSLERDGLRTTALHGDKSQDERLKALASFKAGEV 300

Query: 297 DIVVATDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVT-PRERR 355
           D++V TDVAARGLD+  +  VFN D+P++ E YVHRIGRTGRAG  G A+   +   + R
Sbjct: 301 DLLVCTDVAARGLDIKDVPAVFNFDIPFNAEDYVHRIGRTGRAGASGLAVSFASGGNDAR 360

Query: 356 MLQVIERVTGQKV 368
           ++  IE++  +K+
Sbjct: 361 LVADIEKLIKKKI 373