Pairwise Alignments

Query, 559 a.a., ATP-dependent DEAD-box RNA helicase DeaD from Pseudomonas putida KT2440

Subject, 416 a.a., Superfamily II DNA and RNA helicases from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  285 bits (728), Expect = 3e-81
 Identities = 154/388 (39%), Positives = 236/388 (60%), Gaps = 10/388 (2%)

Query: 8   FAALDLNPNIVAAVVATGYEEPSAIQQQSIPIILAGHDMIGQAQTGTGKTAAFALPILNK 67
           F  L + P I+ A+   GY+EP++IQ Q+IP IL G D++G AQTGTGKTAAFA+PI+  
Sbjct: 3   FKDLRIIPPILKALEDKGYDEPTSIQAQAIPHILEGRDVLGCAQTGTGKTAAFAIPIIQH 62

Query: 68  IDVSK--REPQA----LILAPTRELALQVATAFETYAKQMPGVNVVAVYGGAPMGPQLRA 121
           I  +    EP A    LI+ PTRELA+Q+    + YAK    V+   ++GG   G Q+  
Sbjct: 63  IHEAPYANEPWAKIRSLIVTPTRELAIQIGENIDEYAKNT-NVSHTVIFGGVKQGAQVAQ 121

Query: 122 IRNGAQIVVATPGRLCDHLRRDEKVLSTVQYLVLDEADEMLKLGFMDDLEVIFDAIPATR 181
           ++ G  I+VATPGRL D + +    L  +   VLDEAD ML +GF++D++ +   +P  R
Sbjct: 122 LKKGVHILVATPGRLLDLIDQGHISLKAIDLFVLDEADRMLDMGFINDIKKLLKILPKKR 181

Query: 182 QTVLFSATLPSSIRSIAERHLREPKHVKIQTKTQTVTAIEQAHLMVHADQKIPAVLRLLE 241
           Q++ FSAT+P +I  +++  L  P+ V++   + T   I+Q     +   K   ++ +LE
Sbjct: 182 QSLFFSATMPDNILQLSKEILDNPQKVEVTPVSSTAETIQQYIYYTNKSSKKSLLIHILE 241

Query: 242 VEEFDALIAFVRTKQATLDLAAALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVA 301
            E  D ++ F RTK     +   L+ K  KAAA++GD AQNQR+RV+   KD +L ++VA
Sbjct: 242 KEGMDQVLLFSRTKHGADRIVRDLKKKHIKAAAIHGDKAQNQRQRVLSDFKDNKLRVLVA 301

Query: 302 TDVAARGLDVPRITHVFNVDMPYDPESYVHRIGRTGRAGRDGRALLLVTPRERRMLQVIE 361
           TD+AARG+D+ ++ +V N D+P  PE+Y+HRIGR+GRAG +G A+ L  P E   ++ IE
Sbjct: 302 TDIAARGIDIDKLKYVINFDIPDTPETYIHRIGRSGRAGEEGTAISLCEPEENADVKAIE 361

Query: 362 RVTGQK---VAEARLPNAQAVLDARIKK 386
           ++  +    +++   P     + A+ KK
Sbjct: 362 KLANKNITVISDHPFPQTDKPMTAQEKK 389