Pairwise Alignments

Query, 283 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 290 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

 Score =  174 bits (441), Expect = 2e-48
 Identities = 109/263 (41%), Positives = 147/263 (55%), Gaps = 5/263 (1%)

Query: 1   MSQYQSLDADVLRTFVAIAEQGGFTRAGEVVNRTQSAVSMQMKRLEEDILQRQLFERDGR 60
           MS    LD D+L+ FV++ + GGFTRAGE V+RTQS VS Q++RLE D L  QL  RD R
Sbjct: 1   MSGAAMLDMDLLKAFVSVVDAGGFTRAGERVHRTQSTVSQQVRRLE-DQLGHQLLNRDAR 59

Query: 61  QVRLTAEGQVLLGYARRILKLHGEVFNTLRMPHMVGLVRIGTPDDYAMRFLPTILSSFAQ 120
            V LTAEG+ LLGYARRIL L  E    L       +VR+G PDD+A+  L ++++ FA+
Sbjct: 60  GVSLTAEGERLLGYARRILALGAEARAALSGIAPARVVRLGIPDDFALAALTSVVAEFAR 119

Query: 121 AYPLVQVEVHCDSSKQL---MLRQDLDLTIVTREPGNEIGQLLRQERLVWAAAEGFCPHE 177
           + P V++ V C  S  L     R +LD+ ++ REP +        ERLVW    GF P E
Sbjct: 120 SRPAVRLAVECGLSCDLDAGFARGELDVVLLKREPASGPAVEAWPERLVWVCGAGFEP-E 178

Query: 178 QRPMPVALFNTDCFCRAWTCNALEAQGIDYRIAYTSPSLAAIFAIVTAGLAVTAQLQSLI 237
           +  + +A F   C  R    +ALE  G  +R+AY  PSL  I A +  GL VT      +
Sbjct: 179 EEVVSLAAFRQGCLYRNRAVHALEKAGRSWRVAYECPSLIGIEAALAGGLGVTVLSDLAL 238

Query: 238 GGNIRILGESEGLPQLPMANVML 260
              +R L  S+  P +P   + L
Sbjct: 239 NPKLRELRTSDLWPAIPPTELAL 261