Pairwise Alignments

Query, 312 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 299 a.a., LysR family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  159 bits (402), Expect = 8e-44
 Identities = 103/289 (35%), Positives = 148/289 (51%), Gaps = 3/289 (1%)

Query: 3   MESFSALECFIRSAEVGSFAEAARRLSLTPAAVGKHVAQLEARLGVRLFQRSTRKLTLTE 62
           M+S  +L  F++ AE  SF  A R L ++ +AVGK +A++E RLGVRLF RSTR +TLT 
Sbjct: 1   MDSLGSLSVFVQVAETRSFTAAGRVLGVSSSAVGKSIARMEERLGVRLFHRSTRSITLTS 60

Query: 63  AGQRFLGEVSDSFRTIQYAVANLASAEGQPAGSLRVSMGTVFGRLYVLPLLGEFLRRYPA 122
            G  FL         ++ A   L+ A   P G LR+S+  V G L  +P+L +F+R YP 
Sbjct: 61  EGALFLERSRRILAEVEAAEQELSDASATPRGKLRISVPQVRGLL--MPVLSDFMRAYPD 118

Query: 123 ITPDWHFDNRQVDLIGQGFDAAIGGGFELPPGVVARKLTPAHRVLVAAPAYLQRHASIED 182
           I  D  F +R VD+I +GFDA I  G      ++AR L     VLV  P Y + + + + 
Sbjct: 119 IELDVDFSDRMVDVIEEGFDAVIRTGKPEDSRLMARHLGHYQLVLVGTPGYFREYGTPQQ 178

Query: 183 PQALQRHDGILVRSPQTGRVRSWPLTSRWQAQQPLQLRQAMTMSDSDAACAVAEQGLGIA 242
           PQ L  H  +  +   TG++  WPL     A + + LR     +  ++   V  +GLGIA
Sbjct: 179 PQHLSDHACLRHKFCATGKLEPWPLRRAPGAPESI-LRGPFVSTTIESLNHVVHEGLGIA 237

Query: 243 LVSLPFAVPYLLAGRLLRVLPDWYVDDGHISLYFAEHKLLPGKTRAFID 291
            +        +  GRL RVL D+    G   + +   +    K R FID
Sbjct: 238 CLPDYMVNQAVAEGRLQRVLDDYLEHRGSFWMLWPSSRHASAKLRVFID 286