Pairwise Alignments

Query, 395 a.a., putative uncharacterized transporter YgaY from Pseudomonas putida KT2440

Subject, 425 a.a., efflux transporter from Pseudomonas putida KT2440

 Score =  104 bits (259), Expect = 5e-27
 Identities = 86/379 (22%), Positives = 163/379 (43%), Gaps = 14/379 (3%)

Query: 3   TPTLSRALILLMATATGLAVASNYYAQPLLHSIAQQFGLSTASAGSIVIAAQLSYGAGLL 62
           TP   + ++ L +       A  Y  QP++  ++++F ++ A +  ++  +      GLL
Sbjct: 37  TPAFMKTVLALFSGGFA-TFALLYCVQPMMPLLSREFAINAAQSSLVLSVSTAMLAFGLL 95

Query: 63  LLAPLGDLFEQRRLITMMTVVSTLGLVISACAPSLPWLLLGTALTGL-FSVVAQILVPMA 121
           +  P+ D   ++ ++    V + L  + SA  PS   +L   AL GL  S +A + +   
Sbjct: 96  ITGPISDRIGRKPVMVFALVCAALSTLASAVMPSWELVLATRALVGLSLSGLAAVAMTYL 155

Query: 122 ATLSEPHQRGRAVGTLMSGLLLGILLARTAAGFMAELGGWRSIYVLAAALMALTALALYR 181
           +    P   G A+G  + G  +G +  R   G + +   W +  +    L  + AL  ++
Sbjct: 156 SEEIHPQHIGLAMGLYIGGNAIGGMSGRLITGVLIDFVSWHTAMLTIGGLALVAALVFWK 215

Query: 182 SLPQHHS-HAGLKYPALIGSVFRLFIEEPVLRLRSLLGLLAFSLFALFWTPLAFLLANGP 240
            LP+  +  A    P  +   F +  ++  L    L   L    F   +  + + L   P
Sbjct: 216 VLPESRNFRAQTMNPRSLLDGFVMHFKDAGLPWLFLEAFLLMGAFVTLFNYIGYRLLAEP 275

Query: 241 YHYSDAVIGLFGLAGAAGALSANWAGRLAD---RGKGSLGTTVGLVVLLLSWVPLGFAEQ 297
           YH + A++GL  +   +G  S+   G LAD   R K    + V + V LL  +       
Sbjct: 276 YHMNQALVGLLSVVYLSGIYSSAQVGALADKLGRRKVFWASIVVMAVGLLMTL-----AS 330

Query: 298 SLLALLLGVLMLDLAVQLVHVSNQNAVIALRPEARTRLNAGYITCYFIGGALGSLLGTQL 357
            L+ +++G+L+        H    + +     +A+ + ++ Y+ CY+ G ++    G   
Sbjct: 331 PLVMVIVGMLVFTFGFFGAHSVASSWIGRRALKAKGQASSLYLFCYYAGSSVAGTAGGVF 390

Query: 358 FQRQGWMGIVVAGLVIGGL 376
           + + GW GI   GL IG L
Sbjct: 391 WHQWGWNGI---GLFIGSL 406



 Score = 27.7 bits (60), Expect = 6e-04
 Identities = 37/160 (23%), Positives = 70/160 (43%), Gaps = 19/160 (11%)

Query: 25  NYYAQPLLHSIAQQFGLSTASAGSIVIAAQLSYGAGLLLLAPLGDLFEQ---RRLITMMT 81
           NY    LL   A+ + ++ A  G + +     Y +G+   A +G L ++   R++     
Sbjct: 265 NYIGYRLL---AEPYHMNQALVGLLSVV----YLSGIYSSAQVGALADKLGRRKVFWASI 317

Query: 82  VVSTLGLVISACAPSLPWLLLGTALT--GLFSV--VAQILVPMAATLSEPHQRGRAVGTL 137
           VV  +GL+++  +P L  +++G  +   G F    VA   +   A  +    +G+A    
Sbjct: 318 VVMAVGLLMTLASP-LVMVIVGMLVFTFGFFGAHSVASSWIGRRALKA----KGQASSLY 372

Query: 138 MSGLLLGILLARTAAGFMAELGGWRSIYVLAAALMALTAL 177
           +     G  +A TA G      GW  I +   +L+A+  +
Sbjct: 373 LFCYYAGSSVAGTAGGVFWHQWGWNGIGLFIGSLLAVALM 412