Pairwise Alignments

Query, 174 a.a., conserved protein of unknown function from Pseudomonas putida KT2440

Subject, 201 a.a., Putative ankyrin repeat protein YahD from Escherichia coli ECRC100

 Score = 47.0 bits (110), Expect = 2e-10
 Identities = 51/185 (27%), Positives = 77/185 (41%), Gaps = 39/185 (21%)

Query: 26  ARQGDADMLGRLLASGLPANLRNHKGDTLLMLASYHGHHEAVRLLLAQGADP-------- 77
           A+QGD D +   LA G+  N  + +G T + LAS +  +  V+ L+  GAD         
Sbjct: 14  AQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQDHTCL 73

Query: 78  ---LIANDNGQLP----------------------IAGAAFKGDLAMIRLLVEH-GVPVD 111
              LI+  NG L                       +  A  KG L++++ L+ H  + V+
Sbjct: 74  NPFLISCLNGDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVN 133

Query: 112 AAAQDGRTALMLAAMFN-----RSEILDYLLAQGANPAHQDARGITALMAAQTMGAADTA 166
                G T L+ A + N     +  I+  LL  GA+P   D  G T L  A+  G  + A
Sbjct: 134 QTNHVGWTPLLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIA 193

Query: 167 ARLQA 171
             L A
Sbjct: 194 QLLIA 198



 Score = 35.0 bits (79), Expect = 8e-07
 Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 6/119 (5%)

Query: 29  GDADMLGRLLASGLPANLRNHKGDTLLMLASYHGHHEAVRLLLAQGADPLI-ANDNGQLP 87
           GD  +L  +L +    N     G   L  A   GH   V+ LLA     +   N  G  P
Sbjct: 83  GDLTLLRIILPAKPDLNCVTRFGGVGLTPACEKGHLSIVKELLAHTEINVNQTNHVGWTP 142

Query: 88  IAGAAFKGD-----LAMIRLLVEHGVPVDAAAQDGRTALMLAAMFNRSEILDYLLAQGA 141
           +  A    D      A+++LL+EHG       + G+T L LA      EI   L+A GA
Sbjct: 143 LLEAIVLNDGGIKQQAIVQLLLEHGASPHLTDKYGKTPLELARERGFEEIAQLLIAAGA 201



 Score = 33.9 bits (76), Expect = 2e-06
 Identities = 16/57 (28%), Positives = 33/57 (57%)

Query: 91  AAFKGDLAMIRLLVEHGVPVDAAAQDGRTALMLAAMFNRSEILDYLLAQGANPAHQD 147
           AA +GD+  ++  +  GV ++   + G+TA+ LA+++ +   +  L+  GA+   QD
Sbjct: 13  AAQQGDIDKVKTCLALGVDINTCDRQGKTAITLASLYQQYACVQALIDAGADINKQD 69