Pairwise Alignments

Query, 186 a.a., Smr domain protein from Pseudomonas putida KT2440

Subject, 185 a.a., DNA mismatch repair protein MutS from Pseudomonas simiae WCS417

 Score =  314 bits (805), Expect = 5e-91
 Identities = 151/186 (81%), Positives = 167/186 (89%), Gaps = 1/186 (0%)

Query: 1   MQDDDFSLFKAEVRGVKPIRHDRAEVGKPKADRQKLAGLRQAATVRSDKALVIDGMSDQF 60
           MQDDDFSLFK E+RGVKPI+HDRA+ GKPKADR ++A LRQAATVR++ A  +DG+SDQF
Sbjct: 1   MQDDDFSLFKNELRGVKPIKHDRADTGKPKADRAQIAKLRQAATVRTE-ATTVDGLSDQF 59

Query: 61  VIDVGAEDELMWRRDGVQEGQLRKLKLGQIPFEGSLDLHGMTVEKARETLWDFIAEATKL 120
           VIDVG EDELMW RDGVQE Q+RKLK  QIPFEGSLDLHGM+VEKARETLW F+AEAT+ 
Sbjct: 60  VIDVGPEDELMWARDGVQESQMRKLKAAQIPFEGSLDLHGMSVEKARETLWAFLAEATRF 119

Query: 121 EVRCVRVTHGKAARLDGKRPMIKSHVNTWLRQHPQVLGFASCSARHGGTGAVYVMLKRTM 180
           E+RCVRVTHGKA RLDGKRPMIKSHVNTWLRQH QVLGF SC ARHGG GAVYVML+RTM
Sbjct: 120 EIRCVRVTHGKAVRLDGKRPMIKSHVNTWLRQHAQVLGFTSCQARHGGAGAVYVMLRRTM 179

Query: 181 LEGRDE 186
           +EGRDE
Sbjct: 180 MEGRDE 185