Pairwise Alignments

Query, 317 a.a., putative arabinose 5-phosphate isomerase from Pseudomonas putida KT2440

Subject, 331 a.a., capsule expression protein from Agrobacterium fabrum C58

 Score =  208 bits (530), Expect = 1e-58
 Identities = 128/316 (40%), Positives = 185/316 (58%), Gaps = 10/316 (3%)

Query: 4   NHLDIAKEALVAQAQAVAKLADRLDG----QFQSAVDLILACEGRTVVCGMGKSGLIGKK 59
           N ++ A   +  +   +A L D L       F  A++ I    GR ++ G+GKSG IG K
Sbjct: 12  NAIESAVRTISMERAGLAALEDALRNGLSEPFCKAIETIGQSNGRLIITGVGKSGHIGAK 71

Query: 60  MVATFASTGTPSFFLHPAEAFHGDLGMLKPVDVLVLISYSGETEELIKLIPSLKSFGNKF 119
           + ATFASTGTP+FF+H AEA HGDLGM+   DV++ IS  GE+ EL  +I   + F    
Sbjct: 72  LAATFASTGTPAFFVHAAEANHGDLGMIGGDDVVLAISKGGESAELRSIINYSRRFSIPL 131

Query: 120 IAMTGSGNSTLAKHADIWLDISVDREVCPNNLAPTTSTLATMAMGDALAVALITANQFKP 179
           IA+T S NS+LA+ +DI L +  ++E CP  LAPTTSTL  +A+GDALAVAL+ A  F  
Sbjct: 132 IALTCSENSSLARASDIVLLVPNEQEACPLGLAPTTSTLMQLALGDALAVALLEARNFTA 191

Query: 180 MDFARYHPGGSLGRKLLTRVADVMHS--PAPIVSPASSFQDCLLMMTQSRLGLAMVMD-G 236
            DF  +HPGG LG   LT V+D+MH+    P+V+  ++  + + ++++   G   ++D  
Sbjct: 192 GDFKVFHPGGKLGAS-LTLVSDIMHTGDRVPLVNKGTAMPEAVGVLSRKHFGCVGILDED 250

Query: 237 NELVGIVTDGDLRRALLKNNQVIHASVTEFMTLNPHTIPADCRVSVAEAYMLENKIRALA 296
             L GIVT+GD+ R L +N  +    V + MT +P T+      + A A + +  I AL 
Sbjct: 251 GRLCGIVTEGDMARNLSRN--LAELVVDDIMTRSPKTVKKSVLATSALATLEKFHIGALI 308

Query: 297 VVDDCGAIVGVVEIFD 312
           VVDD    +G+V   D
Sbjct: 309 VVDDDNRPIGLVHFHD 324