Pairwise Alignments

Query, 471 a.a., Outer membrane efflux protein from Pseudomonas putida KT2440

Subject, 451 a.a., transporter from Escherichia coli ECRC101

 Score = 68.6 bits (166), Expect = 4e-16
 Identities = 83/389 (21%), Positives = 159/389 (40%), Gaps = 45/389 (11%)

Query: 58  VLAAYARARSASEQQRAALG-----------SLLPQVSANANSSRILRKNEAERDLYNTE 106
           +L A+AR    + QQ A +G           +  P V    N+    R+ ++   L N  
Sbjct: 53  ILRAFARNPGVT-QQAAQIGIGEAQIDEAKSAWYPHVGLTGNAGPS-RQTDSSGRLDNNV 110

Query: 107 TYSLSLTQYLYNKPAWER-YQKSKSVKDQKGHEAEDTLAEATVDLAKRYFVALAADDELA 165
           +Y ++LTQ +Y+            + +D    +   TL +     A  Y        E++
Sbjct: 111 SYGITLTQLVYDFGKTNNDINLQTAARDSYRFKLMATLTDVAEKTATAYM-------EVS 163

Query: 166 LVQAERRATQKNLDRVSSMFERQMAKI-------TDKLDMQARVDFLLAQEVEARNQVQV 218
             QA   A Q+N+  + +++     +        +D+L  Q R+  + +   + + Q+  
Sbjct: 164 RYQALCDAAQRNIHSLENVYNMAALRANAGLNSSSDELQAQTRIAGMRSTLEQYQAQMAS 223

Query: 219 SREALAEIVGRPITEPLSRVRNDVALQAPTRPLQNWVTQAVENNPLLKSYQSGAEAANAA 278
           ++  LA + G    +P +       L      L+N   Q++   PL+ + ++  ++A   
Sbjct: 224 AKAQLAVLTG---VQPEAIAAPPAELAEQPVSLKNIDYQSI---PLVLAAENLRQSAQYG 277

Query: 279 VREGKGEHYPQLSLS---LSAQQNDQGYDNTQAPRSDSYVASFGVKIPIYSGGSTSARVR 335
           V + K +++P LS+       Q +D+ Y + Q            V  P+Y GG+ SA+V+
Sbjct: 278 VEKTKAQYWPTLSIQGGKTRYQTSDRSYWDDQL--------QLNVNAPLYQGGAVSAQVQ 329

Query: 336 GLYDDQLAAEEQLEGVRRQVVKETTTAYLTAQAAVEKIRANRNALSSAQHSSVAAQKAFT 395
                Q  +  Q+E  +  V++  + AY     A  +  A      SA  +    Q  + 
Sbjct: 330 QAEGQQKISASQVEQAKLDVLQRASVAYANWTGARGREEAGLAQSESAHKTRDVYQNEYK 389

Query: 396 FGVVNAVDVLTAVQNEFKARRDLLKTQYD 424
            G  +  D+LT  Q+ F+A+   +   YD
Sbjct: 390 LGKRSLNDLLTVEQDVFQAQSAEINANYD 418



 Score = 30.0 bits (66), Expect = 2e-04
 Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 13/183 (7%)

Query: 231 ITEPLSRVRNDVALQAPTR-PLQNWVTQAVENNPLLKSYQSGAEAANAAVREGKGEHYPQ 289
           I  PL +  N  A+    +  LQ  + +A   NP +    +      A + E K   YP 
Sbjct: 28  IAAPLPQWANAPAVTPVAQLSLQESILRAFARNPGVTQQAAQIGIGEAQIDEAKSAWYPH 87

Query: 290 LSLSLSAQQNDQGYDNTQAPRSDSYVASFGVKIP--IYSGGSTSARVRGLYDDQLAAEEQ 347
           + L+ +A  + Q      + R D+ V S+G+ +   +Y  G T+  +      + +   +
Sbjct: 88  VGLTGNAGPSRQ---TDSSGRLDNNV-SYGITLTQLVYDFGKTNNDINLQTAARDSYRFK 143

Query: 348 LEGVRRQVVKETTTAYLTA---QAAVEKIRANRNALSSAQHSSVAAQKAFTFGVVNAVDV 404
           L      V ++T TAY+     QA  +  + N ++L +  + +     A   G+ ++ D 
Sbjct: 144 LMATLTDVAEKTATAYMEVSRYQALCDAAQRNIHSLENVYNMAALRANA---GLNSSSDE 200

Query: 405 LTA 407
           L A
Sbjct: 201 LQA 203