Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 432 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  142 bits (357), Expect = 3e-38
 Identities = 111/404 (27%), Positives = 194/404 (48%), Gaps = 53/404 (13%)

Query: 41  WAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVKKGDPLIVLDESQLS 100
           WA    L     G+G V   +  + +Q LEGGI+ +L  R+GD+V +G+ L  LD ++  
Sbjct: 77  WAWSFKLDEVSTGSGKVVPSSREQMIQSLEGGILVDLKVREGDIVDEGEVLAQLDRTKTE 136

Query: 101 AEYESTRNQLIVARYKEARLRAERDGLD-SIPSVIMEGTDSDRAQEALAGEQQVFKARHD 159
           +  + + +++  A    ARL AE  G   + P  +    D  R + AL      +++R +
Sbjct: 137 STVQESASRVRAALAMSARLTAEVGGTPLAFPPEVSSDADLVRTETAL------YQSRRE 190

Query: 160 SLLGEISVNRERIQQMQQQIAGLNDMIRTKAGLNKSYSGEIKQLKELLAEGFVDNQRLLE 219
            L   +S   + +  M++++A                       + L+A G   +  +L 
Sbjct: 191 QLASSLSGVTQALSLMRRELA---------------------LTEPLVARGAASDVEVLR 229

Query: 220 QERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAKELSDVQAQVFDLQE 279
            +R+++  +T+ AD +S                 Q   K   D+AK  ++++AQ    + 
Sbjct: 230 LKRQINEAETKAADLKS-----------------QYYVKAREDLAKANAEIEAQ----RS 268

Query: 280 KEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRD 339
                 D L+R+   +P  G+V D+ V T+GGV+     L+ IVP    L+VEA+++PRD
Sbjct: 269 VTRGRSDSLTRLTFASPVRGIVKDIAVTTVGGVLPPGGKLMVIVPLDEKLLVEARISPRD 328

Query: 340 IDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEERSGD-QYYLVRVKVTEDGMK 398
           +  +  G+ A V+ +A++ A    + GK+T IS D++ ++   D  YY V ++   D +K
Sbjct: 329 VAFIHPGQEAAVKVTAYDYAIFGDLPGKVTTISPDTIQDDVKRDVYYYRVYIRTDVDHLK 388

Query: 399 KLGNRK--LQPGMPAEVLINAGDRTMLQYLLKPARNMFAESLIE 440
               +   + PGM A V I  G +++L YLLKP  N   E+L E
Sbjct: 389 NKNGQSFPIVPGMIATVDIRTGSKSVLDYLLKPL-NKAGEALRE 431