Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 418 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  147 bits (372), Expect = 5e-40
 Identities = 112/403 (27%), Positives = 196/403 (48%), Gaps = 51/403 (12%)

Query: 41  WAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVKKGDPLIVLDESQLS 100
           WA F  L     GTG V   +  + +Q LEGGI+ +L  R+GD+V  G  L  LD ++  
Sbjct: 63  WAWFFKLDEVSTGTGKVVPSSREQMIQSLEGGILVDLKVREGDIVSAGQVLAQLDRTKTE 122

Query: 101 AEYESTRNQLIVARYKEARLRAERDGLDSIPSVIMEGTDSDRAQEALAGEQQVFKARHDS 160
           +  + + +++  A    ARL AE +G   +              + + GE  + +     
Sbjct: 123 STVQESASRVRAALAMSARLTAEVNGTPLV------------FPDEVRGEPGLVRT---- 166

Query: 161 LLGEISVNRERIQQMQQQIAGLNDMIRTKAGLNKSYSGEIKQLKELLAEGFVDNQRLLEQ 220
              E ++ + R +Q+   +AG+N  +            E+   + L++ G   +  +L  
Sbjct: 167 ---ETALYQSRREQLASSLAGVNQAL-------VLMRRELALTEPLVSRGAASDVEVLRL 216

Query: 221 ERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAKELSDVQAQVFDLQEK 280
           +R+++  +T+ AD +S                 Q   K   D+AK  ++++AQ    +  
Sbjct: 217 KRQINEAETKAADLRS-----------------QYYVKAREDLAKANAEIEAQ----RSV 255

Query: 281 EAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPAQSDLVVEAKVAPRDI 340
                D L+R+   +P  G+V D+ V T+GGV+     L++IVP    L+VEA+++PRD+
Sbjct: 256 TRGRSDSLTRLTFASPVRGIVKDIVVTTVGGVLPPGGKLMEIVPLDEKLLVEARISPRDV 315

Query: 341 DRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEERSGD-QYYLVRVKVTEDGMKK 399
             +  G+ A V+ +A++ A    + GK+T IS D++ ++   D  YY V ++   D +K 
Sbjct: 316 AFIHPGQDATVKVTAYDYAIYGGLPGKVTTISPDTIQDDVKRDVYYYRVYIRTDADHLKN 375

Query: 400 LGNRK--LQPGMPAEVLINAGDRTMLQYLLKPARNMFAESLIE 440
              R   + PGM A V I+ G +T+L YL+KP  N  +E+L E
Sbjct: 376 RSGRSFPIVPGMIATVDIHTGSKTVLDYLIKPL-NKASEALRE 417