Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 438 a.a., Type I secretion membrane fusion protein, HlyD family @ Type I secretion system, membrane fusion protein LapC from Variovorax sp. SCN45

 Score =  149 bits (376), Expect = 2e-40
 Identities = 104/404 (25%), Positives = 200/404 (49%), Gaps = 21/404 (5%)

Query: 46  PLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVKKGDPLIVLDESQLSAEYES 105
           P+   V   G V   +  K++QHLEGGIV  +  ++GD VK G PL+ +D        E 
Sbjct: 46  PMETVVVAPGRVIPSDRVKSIQHLEGGIVSSVLVKEGDKVKTGQPLVEIDLGGSGLNLEE 105

Query: 106 TRNQLIVARYKEARLRAERDGLDSIPSVIMEGTDSDRAQEALAGEQQVFKAR----HDSL 161
              +    +    RL AE  G      +  E    D  +    GE   ++AR       +
Sbjct: 106 LTARYAATQATRVRLMAESRG----QPLRRESFAKDIDEGVFEGETGAYQARALEQRGVM 161

Query: 162 LGEIS-VNRERIQQMQQQ--IAGLNDMIRTKAGLNKSYSGEIKQLKELLAEGFVDNQRLL 218
            G +S + + R ++++QQ  + GL D +            E++  ++LL+E  V    +L
Sbjct: 162 AGAVSGLEQARSKKLEQQAKVKGLGDRLELM-------QKELEISEQLLSEKLVGQVEVL 214

Query: 219 EQERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAKELSDVQAQVFDLQ 278
           E+ R+ + +++E+A  +  +      I E + ++ + + ++    + EL+ V+ Q   L 
Sbjct: 215 EKRRQAESVRSELAVARQGVVSADAAITEAQAKMAEAEGRYRRRASDELATVERQFASLS 274

Query: 279 EKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPAQSDLVVEAKVAPR 338
           E  A  R + SR V++AP  G+V  ++  + G VV     +L++VP + +++VEA++ P 
Sbjct: 275 EDLARARTQRSRTVVKAPSDGIVKGLRNSSPGWVVKPGESILEVVPDEDEIMVEARLNPN 334

Query: 339 DIDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEE--RSGDQYYLVRVKVTEDG 396
           D   +E+G+TA V+ +A++      ++GK+  ++AD+  +    +G  YY + + +++  
Sbjct: 335 DRGFIEVGQTARVKITAYDYLRYGAVDGKVKLVAADADRDPAISNGAPYYRLLISMSQSH 394

Query: 397 MKKLGNRKLQPGMPAEVLINAGDRTMLQYLLKPARNMFAESLIE 440
           + +  NR +  GM +EV +  G    + Y+L+P   +  E+  E
Sbjct: 395 VGRDENR-ITAGMESEVDLRVGTDPFIWYILRPVLKLRREAFRE 437