Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 394 a.a., Protein secretion ABC efflux system, membrane fusion protein from Pseudomonas putida KT2440

 Score =  150 bits (378), Expect = 9e-41
 Identities = 117/427 (27%), Positives = 203/427 (47%), Gaps = 55/427 (12%)

Query: 20  DRGIRRIG--LTVVFVTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKEL 77
           D+ + R G  +T+  +    F  WAA+  ++    GTG V   +  + +Q  EGGIV ++
Sbjct: 16  DQAVFRAGRIITLCALMLAAFLAWAAWFEVTEVSTGTGKVIPSSREQVIQSFEGGIVAQM 75

Query: 78  HARDGDLVKKGDPLIVLDESQLSAEYESTRNQLIVARYKEARLRAERDGLD-SIPSVIME 136
              +GDLV++G  L  LD ++ ++    +  +   AR  +ARL+AE  G   + P  + +
Sbjct: 76  SVAEGDLVERGQVLAQLDPTKTASSVGESEAKYRAARASQARLQAEVTGKPLTFPESLRD 135

Query: 137 GTDSDRAQEALAGEQQVFKARHDSLLGEISVNRERIQQMQQQIAGLNDMIRTKAGLNKSY 196
             D   A+ AL                     + R + ++Q +AG+ D ++         
Sbjct: 136 SPDLIDAETAL--------------------YQTRRRGLEQTLAGIQDSLQL-------V 168

Query: 197 SGEIKQLKELLAEGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLK 256
             E+K  + L   G                     A  +  + +   Q  E EL+  + +
Sbjct: 169 RSELKITENLAKMG---------------------ASSRVEVIRLNRQRSELELKANEAR 207

Query: 257 KKFDADVAKELSDVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAA 316
             +     +EL+   A+   L E      D L+R+ +R+P  G+V D++V+T+GGVV   
Sbjct: 208 SDYLVRAREELAKASAEADALSEVIRGRSDSLTRLTLRSPVRGIVKDIEVNTLGGVVQPG 267

Query: 317 TPLLDIVPAQSDLVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSL 376
             ++ IVP    L++E ++APRDI  +   + A V+ SA++ +    ++GK+  IS D+L
Sbjct: 268 GQVMKIVPMDERLLIETRIAPRDIAFIHPDQAAKVKISAYDYSVYGGLDGKVVGISPDTL 327

Query: 377 VEERSGD-QYYLVRVKVTEDGMK-KLGNR-KLQPGMPAEVLINAGDRTMLQYLLKPARNM 433
            +E   +  YY V ++  +D ++ K G R  + PGM A V I  G++T+L YL+KP  N 
Sbjct: 328 QDEVKPEIYYYRVFIRTEQDSLQNKAGKRFAIVPGMIATVDIRTGEKTILDYLIKPL-NR 386

Query: 434 FAESLIE 440
             E+L E
Sbjct: 387 AKEALRE 393