Pairwise Alignments

Query, 441 a.a., HlyD family secretion protein from Pseudomonas putida KT2440

Subject, 461 a.a., HlyD family type I secretion periplasmic adaptor subunit from Magnetospirillum magneticum AMB-1

 Score =  155 bits (392), Expect = 3e-42
 Identities = 114/405 (28%), Positives = 198/405 (48%), Gaps = 16/405 (3%)

Query: 33  VTFGIFGTWAAFAPLSNAVHGTGVVTVQNYRKTVQHLEGGIVKELHARDGDLVKKGDPLI 92
           + F +    +A   +   V     +   +  + VQH EGG + E+   +G LV +GD L+
Sbjct: 34  LAFAVLVGGSAVLEIDEVVTAQARIEPSSQVRHVQHFEGGTISEVLVHEGTLVAEGDVLV 93

Query: 93  VLDESQLSAEYESTRNQLIVARYKEARLRAERDGLDSI--PSVIMEGTDSDRAQEALAGE 150
            L  SQ + +    R +      + ARLRA+ D +  I  P  +    ++ + + A+  E
Sbjct: 94  RLINSQGAGDLADKRARWAAFHARAARLRADLDNVAEIRWPRDVEIDAETRKRELAIHAE 153

Query: 151 QQVFKARHDSLLG-EISVNRERIQQMQQQIAGLNDMIRTKA-GLNKSYSGEIKQLKELLA 208
           +   +A+  +++  EI   R  + + + ++ GL+   R +A G+      E++  ++   
Sbjct: 154 RLSHRAQQATVISREIERRRREVVETETKVTGLS---RAQAKGVE-----EMRIKRKAYD 205

Query: 209 EGFVDNQRLLEQERKLDMLKTEVADHQSSITKTKLQIGETELQIVQLKKKFDADVAKELS 268
            G V NQ +++ ER+  ML TEV+  + SI++ K Q+ E E ++ + +K + A V  E  
Sbjct: 206 SGVVGNQEIVKLEREQLMLDTEVSTARDSISRLKAQMSEAEARLSEFEKGWRAGVLDETG 265

Query: 269 DVQAQVFDLQEKEAALRDRLSRVVIRAPESGMVLDMKVHTIGGVVSAATPLLDIVPAQSD 328
            V+A++  L+       DR SR  IR+P  G+V    + ++G V      L+DIVP    
Sbjct: 266 KVEAELSALRATMEVATDRESRSEIRSPVRGIVKMSAIASVGQVARPGDTLMDIVPVDDA 325

Query: 329 LVVEAKVAPRDIDRLELGKTADVRFSAFNQATTPVIEGKLTRISADSLVEERSGDQYYLV 388
           LVVEAKV P+DI  L  G  A VR SA++Q     + G +  + ADS  E R        
Sbjct: 326 LVVEAKVPPQDIGHLRPGLAASVRLSAYDQFRFGALPGHVVMVGADSFEETRGATTATYY 385

Query: 389 RVKVTEDGMKKLGNR----KLQPGMPAEVLINAGDRTMLQYLLKP 429
           +V++  D  + L  +     ++ GM     I  G +++L+ +L P
Sbjct: 386 KVQIRSDKTELLDGKGVAWPVRSGMAGTASIVIGSKSILRMVLDP 430