Pairwise Alignments

Query, 100 a.a., Integration host factor subunit beta from Pseudomonas putida KT2440

Subject, 90 a.a., HU, DNA-binding transcriptional regulator, alpha subunit from Escherichia coli BL21

 Score = 68.9 bits (167), Expect = 1e-17
 Identities = 32/90 (35%), Positives = 57/90 (63%), Gaps = 1/90 (1%)

Query: 1  MTKSELIERIVTHQGLLSSKDVELAIKTMLEQMSQCLATGDRIEIRGFGSFSLHYRAPRV 60
          M K++LI+ ++  +  LS    + A+++ L  +++ L  GD +++ GFG+F +++RA R 
Sbjct: 1  MNKTQLID-VIAEKAELSKTQAKAALESTLAAITESLKEGDAVQLVGFGTFKVNHRAERT 59

Query: 61 GRNPKTGQSVSLEGKFVPHFKPGKELRDRV 90
          GRNP+TG+ + +    VP F  GK L+D V
Sbjct: 60 GRNPQTGKEIKIAAANVPAFVSGKALKDAV 89