Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 315 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  100 bits (249), Expect = 4e-26
 Identities = 80/280 (28%), Positives = 133/280 (47%), Gaps = 17/280 (6%)

Query: 19  VMAMSAAQAMAKEVSIGYVDGWADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQGVAT 78
           VMA +A  A  + V+   V GW D   TT   +E++K  LGY  +   ++  + ++ +A 
Sbjct: 17  VMAHAAEPAQCQTVNFSDV-GWTDITVTTATTSEILKG-LGYKPRTTMISVPVTYKSLAD 74

Query: 79  GK-LDAMLSAWLPVTHGEYWA-KNKDNVVDYGPNFKDAKIGLIVPEYVKAVSIADLKTDN 136
           GK +D  L  W+P    +    ++   V     N ++AK  L VPE +    + D     
Sbjct: 75  GKNMDVFLGNWMPTMENDIKQYRDAGTVETVRANLENAKYTLAVPEALYNKGLKDFADIA 134

Query: 137 SFKD----RIVGIDAGSGVMLKTDQAIKD---YGLTS--YKLQASSGAAMTAELGRAYAK 187
            FKD    +I GI+ G+    +T Q + D   +GL +  +K+  SS A M +++ RA  +
Sbjct: 135 KFKDELGGKIYGIEPGNDGN-RTIQTLIDKDAFGLKTAGFKVVESSEAGMLSQVERATKR 193

Query: 188 QQSIAVTGWVPHWMFAKWKLKFL---EDPKGVYGAAETVNSIGSKELATKAPEVAEFLKK 244
            Q+I   GW PH M  ++K+K+L   +D  G      T+ +   K    +   V + LK 
Sbjct: 194 DQAIVFLGWEPHPMNTRFKMKYLTGGDDSFGPNYGQATIYTNTRKGYTEECSNVGQLLKN 253

Query: 245 FNWQSKDEIGEVMLAIQEGAKPEAAAKDWVAKHPDRVKEW 284
             +    E   +   + +  KP+AAAK W+ K+P  +  W
Sbjct: 254 LVFTLNMESTLMGNVLDDKMKPDAAAKAWLKKNPQVLDTW 293