Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 338 a.a., ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 56.6 bits (135), Expect = 7e-13
 Identities = 72/314 (22%), Positives = 122/314 (38%), Gaps = 47/314 (14%)

Query: 16  TALVMAMSAAQAMAKEVSIGYVD-GWADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQ 74
           T L ++++A    A E  + + D  W      T V   ++++  GYD+    +    +  
Sbjct: 13  TTLGLSVAALPVSAAEAPVHFADLNWESGSLITEVLRVIVEK--GYDLPTDTLPGTTITL 70

Query: 75  GVATGKLDAMLSAWLPVTHGEYWAKNK--DNVVDYGPNFKDAKIGLIVPEYV-------- 124
             A  K D  +           W K +    VV  G   K A  G  VPEYV        
Sbjct: 71  ETALAKNDIQVIGEEWAGRSPVWVKAEAEGKVVGLGDTVKGATEGWWVPEYVVKGDPAKG 130

Query: 125 ------KAVSIADL-KTDNSFKD-------RIVGIDAGSGVMLKTDQAIKDYGLT-SY-K 168
                 +  S+ DL +  + FKD       R +    G    +   Q +K YGL  SY  
Sbjct: 131 IKPLAPELKSVKDLARYKDVFKDPESPGKGRFLNSPIGWTSEVVNKQKLKAYGLDDSYVN 190

Query: 169 LQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDPKGVYGA------AET 222
            ++ SGAA+ AE+  +  + + +    W P  +  ++KL  LE+P     A      A+ 
Sbjct: 191 FRSGSGAALDAEIASSIRRGKPVLFYYWSPTPLMGRYKLIQLEEPPFDAEAWKTLTDADN 250

Query: 223 VNSIGSKELATKA------------PEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEAAA 270
            N   ++ LA+K             P++A+F +K  +  +     +    +    P   A
Sbjct: 251 PNPKPTRSLASKLSIGVSTPFQKEHPQIAQFFEKVEFPIEPLNKALATMSENHTAPREVA 310

Query: 271 KDWVAKHPDRVKEW 284
           + ++ +HP   K W
Sbjct: 311 QMFLKEHPQVWKAW 324