Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 315 a.a., choline ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  116 bits (290), Expect = 7e-31
 Identities = 74/256 (28%), Positives = 120/256 (46%), Gaps = 11/256 (4%)

Query: 39  GWADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWA 98
           GW D +A TN  + V+   LGY  K+Q ++  + +QG+ TG++D  L  W+P        
Sbjct: 39  GWTD-IAATNAISGVVLNALGYQQKVQNLSVALAFQGLKTGQVDVFLGNWMPAQAPVISK 97

Query: 99  KNKDNVVDY-GPNFKDAKIGLIVPEYVKAVSIADL----KTDNSFKDRIVGIDAGSGVML 153
              D  +   G N   A+  L VP+YV A  + D     K  N F  +I GI  G+    
Sbjct: 98  FTADGSISVLGANLPAARFTLAVPDYVAAAGVKDFADLQKYANQFDHKIYGIAPGAPANQ 157

Query: 154 KTDQAIK--DYGLTSYKLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLE 211
              + I   D+ L ++ L  SS + M A++ RA  ++Q I   GW PH M  ++KL +L 
Sbjct: 158 SLKKMIDAHDFALQNWSLVESSESGMLAQVTRAVERKQWIVFLGWEPHAMNTRFKLAYLS 217

Query: 212 DPKGVYGA---AETVNSIGSKELATKAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEA 268
                +GA     TVN++  K+ A   P +  F  +  +    E   +   +++    + 
Sbjct: 218 GGDNYFGANYGRATVNTVTRKDFAATCPNLNRFYSQLTFDVALENAVIARVLEQQQTAQD 277

Query: 269 AAKDWVAKHPDRVKEW 284
           AA+D + K P+ +  W
Sbjct: 278 AARDELKKRPELLDSW 293