Pairwise Alignments

Query, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

Subject, 317 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 87.0 bits (214), Expect = 5e-22
 Identities = 65/256 (25%), Positives = 109/256 (42%), Gaps = 12/256 (4%)

Query: 39  GWADSVATTNVAAEVIKQKLGYDVKLQAVATGIMWQGVATGKLDAMLSAWLPVTHGEYWA 98
           GW D  AT  VA+ V+   LGY+  ++ ++  I +Q +  G++D  L  W+P        
Sbjct: 42  GWTDITATNGVAS-VLLDALGYEADVKTLSVPIGYQAMKNGEIDVFLGNWMPAQKSFVDD 100

Query: 99  KNKDNVVD-YGPNFKDAKIGLIVPEYVKAVSIADL----KTDNSFKDRIVGIDAGSGVML 153
            N     +    N + AK  L VP Y+    + D     K  + F+ +I GI+ G+    
Sbjct: 101 LNAAKAAEVMTKNLEGAKFTLAVPAYMAEKGVKDFADLAKHADEFESKIYGIEPGAPANQ 160

Query: 154 KTDQAI--KDYGLTSYKLQASSGAAMTAELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLE 211
              + I   D+GL  ++L  S   AM A++ RA   ++++    W PH M  K  + +L 
Sbjct: 161 NIQKIIDANDFGLKGWQLVESGEQAMLAQVERAGRDKKAVVFLAWAPHPMNEKIDIAYLS 220

Query: 212 DPKGVYG---AAETVNSIGSKELATKAPEVAEFLKKFNWQSKDEIGEVMLAIQEGAKPEA 268
                +G       V ++       + P  A   K   +    E   +M +I  G   +A
Sbjct: 221 GGDAYFGPNFGGAEVYTLARTGWPQQCPNAATLFKNLKFDIGME-NSLMGSILGGEDSKA 279

Query: 269 AAKDWVAKHPDRVKEW 284
           AA  W+  +P  +  W
Sbjct: 280 AAAAWLKANPKALDGW 295