Pairwise Alignments

Query, 237 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 265 a.a., HTH-type transcriptional repressor NagR from Xanthobacter sp. DMC5

 Score = 82.8 bits (203), Expect = 6e-21
 Identities = 56/189 (29%), Positives = 93/189 (49%), Gaps = 5/189 (2%)

Query: 23  GLLAPGGKLPAERRLSEVFDTTRITLREALVQLEAQGLIYREERRGWFVAPQRLTYDLIE 82
           G+ APG  LP+E +L+     ++ T+R+AL ++ A+ ++ R + RG FVA       L +
Sbjct: 52  GVWAPGEPLPSEIQLAAELGVSQGTVRKALDEMAAENIVVRRQGRGTFVARHDEERILFQ 111

Query: 83  RSHFHAMVRDQGR--VASTELLSARLQPASAAICARLQLPALSSVVRVCRLRRIDGRAVL 140
              F  +V D G      + +L       +AA CA L LP    V+R+ RLR  DG  ++
Sbjct: 112 ---FFKLVGDDGERHFPESRVLGIERAKGTAAECAALALPRNGRVLRIRRLRTFDGAPLI 168

Query: 141 YAEHYLNPRYFPGILEHDLAQSLTEIYGRVYGIEYGQVCFEILPTALPVEAASALKVSAG 200
                L  + FPG+ +  +  +L  +Y + YGI   +   ++       + A+ L V  G
Sbjct: 169 IESLILPDQMFPGLADAPVPNNLYGLYAQRYGITVARAREQLKAVGADADTAAMLHVEPG 228

Query: 201 SPGLHITRV 209
           +P L I R+
Sbjct: 229 APVLLIDRL 237