Pairwise Alignments

Query, 850 a.a., nitrite reductase [NAD(P)H] large subunit from Pseudomonas putida KT2440

Subject, 676 a.a., hypothetical protein from Magnetospirillum magneticum AMB-1

 Score =  247 bits (631), Expect = 1e-69
 Identities = 173/481 (35%), Positives = 247/481 (51%), Gaps = 15/481 (3%)

Query: 10  RERLVIVGNGMVGHHCVEQLVSRGALQRFEVRVFGEERQRAYDRVHLSEYFGGSCAETLA 69
           R+RLV+VGNGM     VE++++  A  RF + V G E    Y+R+ LS    G   +   
Sbjct: 41  RQRLVVVGNGMAALRTVEEILAL-APDRFHITVLGAEPHGNYNRILLSSVLAGD-KQVGD 98

Query: 70  LCEHD--FYEANGVHLHLGEAVLEIDRERREVVTAAGRY-GYDQLVLATGSYPFVPPIEG 126
           +  H   +Y   G+ L  G+ V+ ID E R V TA+G    +D+L+LATG+ P +P + G
Sbjct: 99  IVTHPPGWYAERGIALRTGDPVVSIDPEHRRVSTASGHVVAWDRLLLATGARPLMPALPG 158

Query: 127 SSGNARLVYRTLDDLDGIRAAAAGARRGVVVGGGLLGLEAANALKSLGLEAHVVEFAPRL 186
           +       +RT+ D+  + A+A   RR VVVGGG+LGLEAA  L+  G+   V+   P L
Sbjct: 159 AGLEGVYGFRTIGDVQAMLASAGRHRRAVVVGGGVLGLEAAWGLRRQGMAVTVIHLTPWL 218

Query: 187 MPVQLDGEGGAALKAQIEALGVGVHLSRATQSVSAGETYRYRMNFDGGEHLETDLIVFSA 246
           M  QLD    A L+  +E  G+   L+ A  +   G      +    G  +  DL+V + 
Sbjct: 219 MERQLDEVAAAMLRHDLERHGIAC-LTSAQAARLEGRERVEAVTLSDGRTIAADLVVMAV 277

Query: 247 GIRPQDALGRGCGLDIAARGGVVIDNHCRSSDPRIFAIGECASWNGSVFGLVAPGYSMAR 306
           GIRP   L R  GL++    G+ +D   RSS P IFA+GEC   +G  +GLV P + MAR
Sbjct: 278 GIRPNTDLARQAGLEVGR--GITVDARMRSSAPDIFAVGECVEHDGQCYGLVMPLWDMAR 335

Query: 307 NLA-GLLMGEAAVAFTGADMSTKLKLLGVDVGSIGDAHGATPGARSYRFIDEANSAYRRL 365
             A  L  GE    FT   +ST+LK+ G+ + S G+   A    R     D   S Y++L
Sbjct: 336 VCAHHLTGGEGERLFTPPSLSTRLKIPGIALFSAGEPAAANDDDRELIHHDPGQSIYKKL 395

Query: 366 VVDASGKHVLGAVLVGDNSYYDTLLQYAQNGI---ALPADPAALILPQGGGAPALGADAL 422
           V+      ++GAVL GD      + Q+  +G     L A    L    G  A A   + L
Sbjct: 396 VLRRG--RLVGAVLYGDVEDSARVWQWLCDGDDVGHLCAGNLCLGRISGQCAAADPLENL 453

Query: 423 PDSATICSCHNVSKGAVCAAI-DSGCSDLAAVKGCTKAATGCGGCAALLKQVFEHELTAR 481
           PD A +C C+ V+KGA+ AAI + G + L  V   T+A +GCG CAAL  ++    L   
Sbjct: 454 PDDAVVCHCNGVTKGAIVAAIAEHGLTSLEQVTARTRACSGCGQCAALTARILARTLGED 513

Query: 482 G 482
           G
Sbjct: 514 G 514



 Score = 26.9 bits (58), Expect = 0.004
 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 17/118 (14%)

Query: 5   ASSGQRERLVIVGNGMVGHHCVEQLVSRG-ALQRFEVRVFGEERQRAYDRVHLSEYFGGS 63
           AS+G+  R V+VG G++G      L  +G A+    +  +  ERQ   D V         
Sbjct: 178 ASAGRHRRAVVVGGGVLGLEAAWGLRRQGMAVTVIHLTPWLMERQ--LDEV--------- 226

Query: 64  CAETLALCEHDFYEANGVHLHLGEAVLEIDRERREVVTAA-GR-YGYDQLVLATGSYP 119
                A+  HD        L   +A     RER E VT + GR    D +V+A G  P
Sbjct: 227 ---AAAMLRHDLERHGIACLTSAQAARLEGRERVEAVTLSDGRTIAADLVVMAVGIRP 281