Pairwise Alignments

Query, 850 a.a., nitrite reductase [NAD(P)H] large subunit from Pseudomonas putida KT2440

Subject, 411 a.a., FAD-dependent oxidoreductase from Magnetospirillum magneticum AMB-1

 Score =  113 bits (283), Expect = 2e-29
 Identities = 89/330 (26%), Positives = 152/330 (46%), Gaps = 21/330 (6%)

Query: 61  GGSCAETLALCEHDFYEANGVHLHLGEAVLEIDRERREVVTAAGR-YGYDQLVLATGSYP 119
           G S  + + L +  F+ AN          + +D + R V    G  + Y  L++A+G+ P
Sbjct: 54  GRSAPDKVLLRDPAFFAANNCAYVPNARAVSLDAKARAVTLENGEVWRYQSLLIASGAAP 113

Query: 120 FVPPIEGSSGNARLVYRTLDDLDGIRAAAAGARRGVVVGGGLLGLEAANALKSLGLEAHV 179
            +PP++G  G    V R+L D +G+R A   A+  VV+G GL+GL AA  +   GL+  V
Sbjct: 114 AIPPVKGLDGVTYHVLRSLADAEGLRGAMGAAKTAVVLGAGLVGLHAAENMAEAGLKVTV 173

Query: 180 VEFAPRLMPVQLDGEGGAALKAQIEALGVGVHLSRATQSVSAGETYRYRMNFDGGEHLET 239
           VE    ++P   D +    ++      GV + L R    V+ G     ++  D G  +  
Sbjct: 174 VEMQGHVLPGYFDAKASTRIEDAFTTHGVELKLGRKVVEVAPG-----KVMVDDGTTIAA 228

Query: 240 DLIVFSAGIRPQDALGRGCGLDIAARGGVVIDNHCRSSDPRIFAIGEC------ASWNGS 293
           DL++ + G+RP      G G  +    GVV+D   R++   ++A G+       AS N +
Sbjct: 229 DLLLVATGVRPVTDWLEGSG--VLVDRGVVVDEAMRTNIDGVWAAGDVAQATDFASGNKA 286

Query: 294 VFGLVAPGYSMARNLAGLLMGEA-AVAFTGADMSTKLKLLGVDVGSIGDAHGATPGARSY 352
           + G++       +     + G++    + G       +  G    SIG A  AT G  + 
Sbjct: 287 LIGIIPTAVEQGKIAGQGMAGDSYRKDYAGGLPVNTYRFFGRVALSIGRA-AATDGVEA- 344

Query: 353 RFIDEANSAYRRLVVDASGKHVLGAVLVGD 382
             ++ A+ AYRRLV++  G  ++G   V +
Sbjct: 345 --VETASGAYRRLVLE--GNRLVGYASVDE 370



 Score = 36.2 bits (82), Expect = 4e-06
 Identities = 33/120 (27%), Positives = 51/120 (42%), Gaps = 15/120 (12%)

Query: 8   GQRERLVIVGNGMVGHHCVEQLVSRGALQRFEVRVFGEERQRAYDRVHLSEYFGGSCAET 67
           G  +  V++G G+VG H  E +   G L+   V + G           L  YF    +  
Sbjct: 143 GAAKTAVVLGAGLVGLHAAENMAEAG-LKVTVVEMQGHV---------LPGYFDAKASTR 192

Query: 68  LALCEHDFYEANGVHLHLGEAVLEIDRERREVVTAAGRYGYDQLVLATGSYPFVPPIEGS 127
           +     D +  +GV L LG  V+E+    + +V        D L++ATG  P    +EGS
Sbjct: 193 I----EDAFTTHGVELKLGRKVVEV-APGKVMVDDGTTIAADLLLVATGVRPVTDWLEGS 247



 Score = 27.7 bits (60), Expect = 0.001
 Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 11/53 (20%)

Query: 6   SSGQRERLVIVGNGMVGHHCVEQLVSRGALQRFEVRVFGEERQRAYDRVHLSE 58
           +SG   RLV+ GN +VG+  V+        + F+V + GE  +R   RV LSE
Sbjct: 348 ASGAYRRLVLEGNRLVGYASVD--------EPFDVGIMGELIRR---RVDLSE 389