Pairwise Alignments

Query, 243 a.a., transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 265 a.a., HTH-type transcriptional repressor NagR from Xanthobacter sp. DMC5

 Score =  157 bits (398), Expect = 2e-43
 Identities = 90/232 (38%), Positives = 128/232 (55%), Gaps = 3/232 (1%)

Query: 11  PRYQQLRDHMVAQIANNRWRPGEAIPTEAALATEFDLSIGTVRKAVDVLVAEGVLERQQG 70
           P Y+Q+R+ ++ ++ +  W PGE +P+E  LA E  +S GTVRKA+D + AE ++ R+QG
Sbjct: 36  PLYRQVRETLIRRMVDGVWAPGEPLPSEIQLAAELGVSQGTVRKALDEMAAENIVVRRQG 95

Query: 71  RGTFIRRPQFQSSLFRFFRFEAANGERIVPESRILSIESLPAPSAVAEALGLAGEAEVIR 130
           RGTF+ R   +  LF+FF+    +GER  PESR+L IE     +A   AL L     V+R
Sbjct: 96  RGTFVARHDEERILFQFFKLVGDDGERHFPESRVLGIERAKGTAAECAALALPRNGRVLR 155

Query: 131 IIRTRLLGAQPVLAEEIWLPRQTFQPLLDVDLNSEGPLLYPIYEALCGQVVAYAEETLTA 190
           I R R     P++ E + LP Q F  L D  + +    LY +Y    G  VA A E L A
Sbjct: 156 IRRLRTFDGAPLIIESLILPDQMFPGLADAPVPNN---LYGLYAQRYGITVARAREQLKA 212

Query: 191 EAVDAVHGRLLQLPADSPVVVIERLARDYAGKPLEWRRSRGHAQHFRYRIDI 242
              DA    +L +   +PV++I+RLA    G P+EWR S      F Y  D+
Sbjct: 213 VGADADTAAMLHVEPGAPVLLIDRLAYSLDGTPVEWRVSFCLTAGFHYLSDL 264