Pairwise Alignments

Query, 243 a.a., transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 243 a.a., Predicted transcriptional regulator of N-Acetylglucosamine utilization, GntR family from Sphingobium sp. HT1-2

 Score = 79.7 bits (195), Expect = 5e-20
 Identities = 72/228 (31%), Positives = 110/228 (48%), Gaps = 14/228 (6%)

Query: 6   GDARLPRYQQLRDHMVAQIANNRWRPGEAIPTEAALATEFDLSIGTVRKAVDVLVAEGVL 65
           G+   P Y QL  ++   I +    PG A+P+E  L+    +S  TVRKA++ L+ EGVL
Sbjct: 9   GEDGTPLYLQLARNLRDHIESGGIIPGNALPSERDLSEMAGISRVTVRKAIEQLIEEGVL 68

Query: 66  ERQQGRGTFI-RRPQFQSSLFRFFRFEAANGERIVPESRILSIESLPAPS-AVAEALGLA 123
            R+QG GTF+ RR +  +S+   F  +A +  R      I  ++S   P+   A AL ++
Sbjct: 69  FRKQGSGTFVARRIETPASVLSSFTHDALS--RGEDPGVIWMMKSYAQPTEEEAAALSIS 126

Query: 124 GEAEVIRIIRTRLLGAQPVLAEEIWLPRQTFQPLLDVDLNSEGPLLYPIYEAL--CGQVV 181
             A V R+ R RL G +P+  E   +P          DL + G  L   YEA+   G   
Sbjct: 127 PSARVARLGRVRLSGGEPLAIEHAIVPADCLP-----DLTTIGDSL---YEAMGRAGFRP 178

Query: 182 AYAEETLTAEAVDAVHGRLLQLPADSPVVVIERLARDYAGKPLEWRRS 229
               + + A         LL +  +S V+ IER+ R   G+ +E+ RS
Sbjct: 179 TSGTQRVRASLATPTEAGLLCVRQNSEVLRIERITRIPGGRAVEFTRS 226



 Score = 22.3 bits (46), Expect = 0.009
 Identities = 18/79 (22%), Positives = 31/79 (39%), Gaps = 1/79 (1%)

Query: 10  LPRYQQLRDHMVAQIANNRWRPGEAIP-TEAALATEFDLSIGTVRKAVDVLVAEGVLERQ 68
           LP    + D +   +    +RP        A+LAT  +  +  VR+  +VL  E +    
Sbjct: 157 LPDLTTIGDSLYEAMGRAGFRPTSGTQRVRASLATPTEAGLLCVRQNSEVLRIERITRIP 216

Query: 69  QGRGTFIRRPQFQSSLFRF 87
            GR     R  ++   + F
Sbjct: 217 GGRAVEFTRSVYRGDRYDF 235