Pairwise Alignments

Query, 1159 a.a., putative Sodium-solute symporter/sensory box histidine kinase/response regulator from Pseudomonas putida KT2440

Subject, 632 a.a., putative hybrid sensor and regulator, histidine kinase from Pseudomonas putida KT2440

 Score =  297 bits (760), Expect = 2e-84
 Identities = 181/438 (41%), Positives = 260/438 (59%), Gaps = 27/438 (6%)

Query: 740  GFVMSFTDITPFREAEQALRDANERLEQRVAERTHELSQLNQAL--------------SE 785
            G  +   DIT  R   QAL  A + LEQRV ERT EL+ LN  L               E
Sbjct: 197  GIFVLIRDITERRNTAQALHQAYQHLEQRVRERTAELTSLNDQLLREIEERSQAESRLRE 256

Query: 786  AKSQAEAVSNSKTRFLAAVSHDLMQPLNAARLFSAALSQQAEGMNEEARQLVQHMDSSLR 845
            AK +AE  + SKT+FLAAVSHDL+QPLNAARLF++AL ++ E  N  A  LV+++ +SL 
Sbjct: 257  AKREAEQANLSKTKFLAAVSHDLLQPLNAARLFTSALLERDEPQN--AAHLVRNVSNSLE 314

Query: 846  SAEELISDLLDISRLENGKITPDAKPFALNELFDTLGAEFKLLAAEKGLEFRLRGSRLRV 905
              E L+  L+DIS+L+ G I  D  PFAL+EL D L AE+  +A  +GLE    G    V
Sbjct: 315  DVENLLGTLVDISKLDAGVIKADVAPFALHELMDNLAAEYVQVARSEGLELHFVGCSAVV 374

Query: 906  DSDMKLLRRVLQNFLTNALRYGKSP-ILLGARRQGERLWLEVWDRGPGIADDKLQVIFQE 964
             SD++LL R+L+N L+NA+RY  S  ++LG RR    + +EVWD G GIA++ LQ +F E
Sbjct: 375  RSDIQLLARILRNLLSNAIRYTPSGRVVLGCRRLRGGVRIEVWDSGIGIAEEHLQDMFLE 434

Query: 965  FKRLDSHQTRAEKGLGLGLAIADGLCRVLGHPLEVRSWPGKGTVFRVSVPIARQA-AAAP 1023
            FKR D  +   ++GLGLGLAI + +  +LGH + VRSW GKG+VF V VP++  A  A P
Sbjct: 435  FKRGDVQRPDQDRGLGLGLAIVEKIAGILGHRIRVRSWLGKGSVFAVEVPLSTTAPKAQP 494

Query: 1024 STPVEQQGGQPLAGLQVLCVDNEDSILIGMNSLLSRWGCQVWTARNQAECEALLAKGMRP 1083
            S  + +   + L G +V  +DN+ +I  GM +LL  WGC+V TA ++ +    LA+ +  
Sbjct: 495  SQVICEPMLERLRGARVWVLDNDAAICAGMRTLLEGWGCRVVTALSEED----LARQVDN 550

Query: 1084 H-----LALVDYHLDDGETGTGLMGWLRARLGEPVPGVVISADGSKETIALVHASGLDYL 1138
            +     L + DYHLD+   G   +  + AR  +P+P ++I+ + S +    +   G   +
Sbjct: 551  YHADADLLIADYHLDNDCNGVDAVARINARRAQPLPALMITVNYSNDLKQQIRELGHTLM 610

Query: 1139 AKPVKPAALRALLNRHLS 1156
             KPV+P  L+  ++  L+
Sbjct: 611  HKPVRPMKLKTAMSHLLA 628



 Score = 28.1 bits (61), Expect = 0.002
 Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)

Query: 754 AEQALRDANERLEQRVAERTHELSQLNQALSEAKSQAEAVSNSKTRFLAAVSHDLMQPLN 813
           AEQ +R+  + L Q +AE    L  +N+ LSEA+ +AE     + R +      L+  LN
Sbjct: 58  AEQ-VRERTDALNQAMAE----LKAVNRLLSEARQRAETAHQHQIRLITDNVPALIAYLN 112

Query: 814 A 814
           A
Sbjct: 113 A 113