Pairwise Alignments

Query, 235 a.a., regulator of DnaA that prevents premature reinitiation of DNA replication from Pseudomonas putida KT2440

Subject, 252 a.a., DnaA inactivator Hda (shorter homolog of DnaA) from Variovorax sp. SCN45

 Score = 99.0 bits (245), Expect = 8e-26
 Identities = 68/231 (29%), Positives = 124/231 (53%), Gaps = 11/231 (4%)

Query: 6   QLPLGVRLRDDATFINYYPGANAAALGYVERL---CEADAGWTESLIYLWGKQGVGRSHL 62
           QL L + +    +F  ++ G N AAL +++       A A  +    YLWG+ G G++HL
Sbjct: 27  QLALDIGIATGPSFDAFFAGPNEAALRHLQVWVGGAGAPALHSPVPTYLWGEGGSGKTHL 86

Query: 63  LQAATHRFQQRGEPAVYLPLAQLLDRGVELLDYLAQYELVCIDDLHVIAGKADWEEAMFH 122
           L++     +++G    +L    L     E  ++  ++  V +DD+H+    A  + A F+
Sbjct: 87  LESVRVALREQGASVGWLHAGLL-----EPPEFDERWGAVLLDDVHLYT--AVQQHAAFN 139

Query: 123 LFNRLRDSGRRLLLAASASPRELPIKLPDLKSRLTLALVFQMRGLSDEDKLRALQLRASR 182
            F   +   R ++ A +  P +LP++  DL++RL    VF ++ LS+ ++   L+  A  
Sbjct: 140 WFVNAQTLQRGVVAAGALPPADLPLR-EDLRTRLGWGHVFHLQVLSESERRAVLRQAADA 198

Query: 183 RGLHLTDEVGHFILTRGARSMSALFDLLERLDQASLQAQRKLTIPFLKETL 233
           RG+ L+D+V  ++L R +R + +L +LL +LD  +LQ QR +TIP ++  L
Sbjct: 199 RGVMLSDDVLDYMLHRFSRDLGSLMELLSQLDGYALQTQRAITIPLIRSML 249