Pairwise Alignments

Query, 458 a.a., histidine kinase from Pseudomonas putida KT2440

Subject, 537 a.a., HAMP domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  104 bits (260), Expect = 6e-27
 Identities = 79/254 (31%), Positives = 124/254 (48%), Gaps = 18/254 (7%)

Query: 209 RHDELGELARAFDQMAERLQGTVAMQQQLLRDLSHEMRTPLSRLRVACDGETDLQ----- 263
           R DE+GEL+ A  +M E L   +   +    D++HE++ PL+ LR A +    ++     
Sbjct: 289 RKDEIGELSVALKEMTEALWRRMDAIEAFAADVAHEIKNPLTSLRSAVETAARIEDPDKR 348

Query: 264 -RLRDRLIREVDCMQQLVEDTLQLAWQDAERAPMNLEPIEVHALWELLAENASYESGWSP 322
            RL   ++ +V  + +L+ D    +  DAE +     P+ + A+ + LAE   Y      
Sbjct: 349 ARLMSIVLDDVGRLDRLISDISDASHIDAEMSRAETGPVALAAMLDTLAE--IYRGTCED 406

Query: 323 AQLRCEVPAD----CWVQGNLNHLAQALENILRNAIRHSPAEGVVRLGGQREGSYWWLWL 378
             LR EV         VQG  + L Q L N++ NA   SP  G++RL   R+G    L +
Sbjct: 407 RGLRFEVERPEGDALTVQGIESRLVQVLRNLIANAASFSPDGGLIRLAAHRDGGRIALVV 466

Query: 379 EDEGGGVAEEDLERIFAPF--SRLDGSRPGDGGFGLGLSIARSAIQRQGGTLWAQNGKRG 436
           ED+G G+    L+ IF  F   R +G + G    GLGLSI+R  ++  GG + A+N   G
Sbjct: 467 EDQGPGIPANKLDAIFERFYSERPEGEKFGTHS-GLGLSISRQIVEAHGGAIRAENRDEG 525

Query: 437 LRLWMRLPLHVPAS 450
                R  + +PA+
Sbjct: 526 ---GARFTVDIPAA 536