Pairwise Alignments

Query, 458 a.a., histidine kinase from Pseudomonas putida KT2440

Subject, 472 a.a., HAMP domain-containing protein from Dickeya dianthicola ME23

 Score =  150 bits (379), Expect = 9e-41
 Identities = 144/466 (30%), Positives = 215/466 (46%), Gaps = 46/466 (9%)

Query: 7   LFWK--LAILLVGFC---LLMIGLSYTWGRHMETQNAFLSEPARQTLRGYAAEAEQAWRS 61
           LFWK  L + L  F    LL +G S+  GR+   +        + T+    A A QA R 
Sbjct: 5   LFWKILLGLWLTFFVISQLLWVGFSFYGGRNEPPEVRL----GKHTMSLQMALAVQALRQ 60

Query: 62  GGRAGLDQWVAAMHQRERGWVGVLDINLRPLDSATLNPQIMQRLTRLRGVDWPMSRRSVD 121
           GG   L + +A   + ERG++ V  I     D A    +    +  L     P       
Sbjct: 61  GGMVELGRTLADWPKSERGYINVSIIGDND-DVAGFGGEPPPEMGMLGEPPRPPEPGFGP 119

Query: 122 QPWVRIPFPGA----PEQGML-VIELP--QRFNPGQHRLLWR---IVTNGIIPGLFTL-- 169
            P   IP PG     P+   L V++ P  QR+    +   WR   +  NG  P  F L  
Sbjct: 120 GP---IPGPGGRLEQPDAASLQVVDGPDGQRYRVSFNTARWRQDLMPENGPAPIPFFLHL 176

Query: 170 ------------LLCVGLYRM-LIVPLNQLREQANAWRADQLSARLDSRTIARHDELGEL 216
                       LL  G+    L  PL+QLR          LS RL      RHDE+G++
Sbjct: 177 PPPMIWLGALGGLLFSGMLAWNLARPLSQLRASFERVAQGDLSVRLYPSMRRRHDEIGDV 236

Query: 217 ARAFDQMAERLQGTVAMQQQLLRDLSHEMRTPLSRLRVAC----DGETDLQRLRDRLIRE 272
           AR FD M  RL   V+ ++QLL D+SHE+R+PL+RL++A         +++    R+ RE
Sbjct: 237 ARDFDAMVGRLSVLVSAREQLLHDVSHELRSPLARLQLAIGLARQNPDNVENALQRIERE 296

Query: 273 VDCMQQLVEDTLQLAWQDAERAPMNLEPIEVHALWELLAENASYESGWSPAQLRCEVP-- 330
            + M +++ + L L+  + + A  N E  ++  L   +  +A YE+      +   +   
Sbjct: 297 AERMDKMIGEVLTLSRAEND-AVNNEEYFDLLGLVNAVVNDARYEAQVPGVDIALNISDY 355

Query: 331 ADCWVQGNLNHLAQALENILRNAIRHSPAEGVVRLGGQREGSYWWLWLEDEGGGVAEEDL 390
            D  V+G+   +  AL+NI+RNA+R S     V +   R+   W + + D G GV E  L
Sbjct: 356 DDYTVKGSAELMRHALDNIIRNALRFSSRGQQVLVTLSRDEKNWCIGVADRGPGVEESKL 415

Query: 391 ERIFAPFSRLDGSRPGDGGFGLGLSIARSAIQRQGGTLWAQNGKRG 436
             IF PF R+D  + G  G+GLGL+IAR A+   GG + A+N  +G
Sbjct: 416 SSIFDPFMRIDSPQSGK-GYGLGLAIARKAVVAHGGRIEAENRDQG 460