Pairwise Alignments

Query, 458 a.a., histidine kinase from Pseudomonas putida KT2440

Subject, 467 a.a., HAMP domain-containing protein from Dickeya dadantii 3937

 Score =  143 bits (360), Expect = 1e-38
 Identities = 140/473 (29%), Positives = 210/473 (44%), Gaps = 65/473 (13%)

Query: 7   LFWK--LAILLVGFC---LLMIGLSYTWGRHMETQNAFLSEPARQTLRGYAAEAEQAWRS 61
           LFWK  L + L  F    LL +G S+ +G   E          + T+    A A QA R 
Sbjct: 5   LFWKILLGLWLTFFVISQLLWVGFSF-YGERPEPPEV---RQGKHTMSLQMALAAQALRQ 60

Query: 62  GGRAGLDQWVAAMHQRERGWVGVLDINLRPLDSATLNPQIMQRLTRLRGVDWPMSRRSVD 121
           GG A L + +A   + ER ++ V  I          + + M   T L G+  P       
Sbjct: 61  GGMAELGRTLADWPKNERVYINVSVIG---------DNEDMAGNTSLPGMGIPGGPLGPP 111

Query: 122 QPWVRIPFPGAPEQGML---------VIELP--QRFNPGQHRLLWRIVTNGIIP------ 164
           +    +P  G    G+L         V++ P  QR+        WR   N +IP      
Sbjct: 112 E----LPGFGPGPDGLLDQFEKMSKQVVDGPDGQRYRISFDTTRWR---NDVIPKDIPAP 164

Query: 165 ---------------GLFTLLLCVGLYRMLIVPLNQLREQANAWRADQLSARLDSRTIAR 209
                           L  LL    L   L  PL++LR          LS RL      R
Sbjct: 165 LPFFLHLPPPMIWIGALGGLLFSGMLAWNLARPLSRLRASFERVAQGDLSVRLYPSMRRR 224

Query: 210 HDELGELARAFDQMAERLQGTVAMQQQLLRDLSHEMRTPLSRLRVAC----DGETDLQRL 265
           HDE+G++AR FD M  RL   V  ++QLL D+SHE+R+PL+RL++A         +++  
Sbjct: 225 HDEIGDVARDFDAMVGRLSVLVGAREQLLHDVSHELRSPLARLQLAIGLARQNPDNVENA 284

Query: 266 RDRLIREVDCMQQLVEDTLQLAWQDAERAPMNLEPIEVHALWELLAENASYESGWSPAQL 325
             R+ RE + M +++ + L L+ +    A  N E  ++  L   +  +A YE+      +
Sbjct: 285 LQRIEREAERMDKMIGEVLTLS-RAENNAVNNEEYFDLLGLVNAVVNDARYEAQVPGVDI 343

Query: 326 RCEVP--ADCWVQGNLNHLAQALENILRNAIRHSPAEGVVRLGGQREGSYWWLWLEDEGG 383
              +    D  V+G+   +  AL+NI+RNA+R S     V +   R+   W + + D G 
Sbjct: 344 ALSISDYDDYTVKGSAELMRHALDNIIRNALRFSSRGQQVLVTLSRDEKEWCIGVADRGP 403

Query: 384 GVAEEDLERIFAPFSRLDGSRPGDGGFGLGLSIARSAIQRQGGTLWAQNGKRG 436
           GV E  L  IF PF R+D  + G  G+GLGL+IAR A+   GG + A+N  +G
Sbjct: 404 GVEESKLSSIFDPFMRIDSPQSGK-GYGLGLAIARKAVVAHGGRIEAENRDQG 455