Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 923 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  267 bits (682), Expect = 3e-75
 Identities = 177/543 (32%), Positives = 289/543 (53%), Gaps = 18/543 (3%)

Query: 269 NIELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIE 328
           ++  D+A   A  A+  K+EFLA +SHEIRTP+NG+LG T LL  + ++ +Q DY+ TI 
Sbjct: 384 SLSRDLAASNAEIAA--KAEFLAKISHEIRTPMNGVLGMTELLLGTPLSVKQRDYVQTIH 441

Query: 329 KSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIY 388
            + + LL +INEILD SK+E+G++ LD + F+L  LI+D L+I    A  + +EL+S I 
Sbjct: 442 SAGNELLTLINEILDISKLESGQIELDDVQFDLNALIEDCLSIFRAKAEQQNVELISFIQ 501

Query: 389 RDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIG 448
              P  + GDP RL+Q + +L+ NA++ T EG +++   L+D      +LRI+VQD+G+ 
Sbjct: 502 PQVPRVISGDPTRLRQAMLSLLENALQKTDEGEVLIVVALDDRSTK-PRLRIAVQDSGLP 560

Query: 449 LSPQDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWIS 508
           +   +   L  +   + N  +       LGLVI+++LI  M GE G+ S   +GS  W++
Sbjct: 561 MEAAERDALLHSELHSKNFFSATRLNGHLGLVIARQLILLMNGEFGIKSGSHQGSTLWLT 620

Query: 509 LNL-PKAHDDAEALPPQPLLGRRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQG 567
           L L P+  +   +    PL G R  +VD ++  R+ L  Q    GL+VS   S  + L  
Sbjct: 621 LPLDPERLEHPTSDLDGPLKGARVLVVDDNDTCRKVLVQQCSAWGLNVSAVPSGKEALAL 680

Query: 568 VQAASQAGLPFEFAVLGANLGNLSPEQL-GHYHQQLERYHCQCVVLCPTTEQALYHPYLP 626
           ++  +     F+  +L  N+  ++  QL     +     H   +++      A       
Sbjct: 681 LRTKAHLRDYFDVVLLDQNMPGMTGMQLAAKIKEDPSLNHDILLIMLTGISNAPSKIIAR 740

Query: 627 N-GHGQLLSKPTCTRKLRRLLL-ELVQ------PRRPLAEGSNPNGQRRP---KILCVDD 675
           N G  ++L+KP     L+  L  EL Q      P RP+   + P     P   +IL  +D
Sbjct: 741 NCGIKRILAKPVAGYTLKTTLADELTQRSKGNVPPRPVL--NTPAAITVPTDFRILVAED 798

Query: 676 NAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRL 735
           N+ +  +++ +L  L       +NG  A++A++ + +DLVLMD +MP +DG + T+Q+R 
Sbjct: 799 NSISTKVIRGMLGKLNLNPDTASNGEEALEAMKAQRYDLVLMDCEMPILDGFSATQQLRA 858

Query: 736 WENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKWTGLSLGTP 795
           WE +      P+VALTAH ++  K     +GMD ++ KP+   QL ++V  W       P
Sbjct: 859 WEVSHQRVRTPVVALTAHILSEHKERARQAGMDGHMAKPVELSQLRELVEFWVAQRQQRP 918

Query: 796 QQA 798
           + A
Sbjct: 919 EHA 921