Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 917 a.a., chemotaxis protein CheY from Pseudomonas simiae WCS417

 Score = 1300 bits (3363), Expect = 0.0
 Identities = 673/918 (73%), Positives = 769/918 (83%), Gaps = 2/918 (0%)

Query: 1   MLDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPA 60
           ML R+GI+ RVLLL LLP  LMA +LG YFTW+Q ++L+TQLLQRG+MIAEQLAPL APA
Sbjct: 1   MLTRMGIKGRVLLLTLLPTSLMASLLGGYFTWMQLSELQTQLLQRGEMIAEQLAPLVAPA 60

Query: 61  MARLAPAQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLLQRSG 120
           ++      LERIA Q+LEQ DVRAV+FL+P+R  LAHAGP+MLN PP G + + LLQR+G
Sbjct: 61  LSARNTELLERIATQSLEQPDVRAVSFLSPERAPLAHAGPTMLNQPPVGNS-SHLLQRTG 119

Query: 121 NDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILAC 180
           NDATRYL+PVFG HR+LA + +P EA+RLLGWVE+ELSH+G LLRGYR+LF SLLLI   
Sbjct: 120 NDATRYLLPVFGRHRNLAGELIPDEADRLLGWVEVELSHNGMLLRGYRSLFASLLLIAIG 179

Query: 181 LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETL 240
           L  +  LALR+SRTIN PI +IK AV QLKDG+LE RLP +GS ELD+LA GINRMAETL
Sbjct: 180 LICTAALALRISRTINSPIGQIKQAVAQLKDGNLETRLPPLGSQELDQLASGINRMAETL 239

Query: 241 QNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP 300
           QNA EELQHSIDQATEDVRQNLETIEIQNIELD+ARKEALEASRIKSEFLANMSHEIRTP
Sbjct: 240 QNAQEELQHSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTP 299

Query: 301 LNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFN 360
           LNGILGFTHLLQKSE+TPRQLDYL TIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFN
Sbjct: 300 LNGILGFTHLLQKSELTPRQLDYLGTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFN 359

Query: 361 LRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREG 420
           LRDL+QDTLTILAPAAHAKQLEL+SL+YRDTP +LVGDPLRLKQILTNL+SNAIKFTREG
Sbjct: 360 LRDLLQDTLTILAPAAHAKQLELVSLVYRDTPLALVGDPLRLKQILTNLISNAIKFTREG 419

Query: 421 TIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLV 480
           TIV RAM+EDE ED  QLRISVQDTGIGLS QDVR LFQAFSQADNSL+RQPGGTGLGLV
Sbjct: 420 TIVARAMIEDEQEDSVQLRISVQDTGIGLSSQDVRALFQAFSQADNSLSRQPGGTGLGLV 479

Query: 481 ISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLLGRRAAIVDGHELA 540
           ISKRLIEQMGGEIGVDSTPGEGS+FWISLNLPK  DD E LP  PLLG R A+++ HELA
Sbjct: 480 ISKRLIEQMGGEIGVDSTPGEGSEFWISLNLPKTRDDVEDLPSAPLLGHRVAVLENHELA 539

Query: 541 RQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQLGHYHQ 600
           RQAL+HQLEDCGL V+ F S + L  G+ +A Q     + AVLG    ++ PE+L  +  
Sbjct: 540 RQALQHQLEDCGLEVTPFNSLESLTNGITSAHQTEQAIDLAVLGVTANDIPPERLNQHLW 599

Query: 601 QLERYHCQCVVLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLELVQPRRPLAEGS 660
            LE   C+ +VLCPTTEQ L++  +PN + QL +KP CTRKLRR L +L+ PR   +E  
Sbjct: 600 DLEHLGCKVLVLCPTTEQMLFNQSVPNPNSQLQAKPACTRKLRRALSDLISPRPSRSEPG 659

Query: 661 NPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQ 720
            P   R P++LCVDDN ANLLLV+TLLED+GA V AV +GYAA+ AV+++ FDLVLMDVQ
Sbjct: 660 EPLSSRAPRVLCVDDNPANLLLVQTLLEDMGARVRAVESGYAAIDAVKQDTFDLVLMDVQ 719

Query: 721 MPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQL 780
           MPGMDGR  TE IR WE+ +SG PLP+VALTAHAMANEKRALL SGMDDYLTKPISERQL
Sbjct: 720 MPGMDGRQSTEAIRQWESERSGTPLPVVALTAHAMANEKRALLQSGMDDYLTKPISERQL 779

Query: 781 AQVVMKWTGLSL-GTPQQAQAELLTNGDELKVLDPEEGLRLAAGKADLAADMLSMLLASL 839
           AQVV+KWTGL+L     +  A+ L  G +L VLD EEGLRLAAGKADLAADML+MLLASL
Sbjct: 780 AQVVLKWTGLALRNQGPERVADGLGPGVQLPVLDHEEGLRLAAGKADLAADMLAMLLASL 839

Query: 840 DTDREAIRAARAADDRNGLIEQVHRLNGASRYCGVPQLRAACQRSETLLKQDNPQAQQAL 899
           + DR AI  AR A+D N LIE+VHRL+GA+RYCGVPQLRAAC R+ETLLKQD+ +AQ AL
Sbjct: 840 EADRLAITIARDANDNNALIERVHRLHGATRYCGVPQLRAACHRAETLLKQDDAKAQHAL 899

Query: 900 DELDSAISRLAAQARLSA 917
           DELD AI+RLA++AR++A
Sbjct: 900 DELDMAIARLASEARVNA 917