Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 923 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  273 bits (698), Expect = 4e-77
 Identities = 179/541 (33%), Positives = 282/541 (52%), Gaps = 12/541 (2%)

Query: 258 VRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMT 317
           V + L  I  +      A   +      K+EFLA +SHEIRTP+NG+LG T LL  + ++
Sbjct: 370 VSERLRRISEERFSASRALAASDAEINAKAEFLAKISHEIRTPMNGVLGMTELLLGTPLS 429

Query: 318 PRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAH 377
            +Q DY+ TI  + + LL +INEILD SK+E+ ++ LD + F+L  LI+D L I    A 
Sbjct: 430 VKQRDYVQTIHSAGNELLTLINEILDISKLESRQIELDDVQFDLNALIEDCLNIFRAKAE 489

Query: 378 AKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQ 437
            + +EL+S      P  + GDP RL+Q L++L+ NA+K T +G I++   L D+  +  +
Sbjct: 490 QQNIELISFTQPQVPRVISGDPTRLRQALSSLLENALKNTDQGEILLVVAL-DQRGEVPR 548

Query: 438 LRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDS 497
           LRI+VQD+G  L   D   L QA   + + L+    G  LGLVI+K+LI  M GE G+ S
Sbjct: 549 LRIAVQDSGEPLPAADREALLQAELHSHHFLSSNKLGGHLGLVIAKQLIGLMQGEFGIKS 608

Query: 498 TPGEGSQFWISLNL-PKAHDDAEALPPQPLLGRRAAIVDGHELARQALEHQLEDCGLSVS 556
           + G G+  W++L L P   +   A    PL   R  +VD ++  R+ L  Q    G++VS
Sbjct: 609 STGMGNTLWLTLPLDPSRLEQPPADLDSPLRDARVLVVDDNDTCRKVLVQQCSAWGMNVS 668

Query: 557 LFASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQL-GHYHQQLERYHCQCVVLCPT 615
              S  + L  ++  +     F+  +L  N+  ++  QL     +     H   VV+   
Sbjct: 669 AVPSGKEALALLRTKAHLRDYFDAVLLDQNMPGMTGMQLAAKIKEDPSLNHDILVVMLTG 728

Query: 616 TEQALYHPYLPN-GHGQLLSKPTCTRKLRRLLLELVQPR-----RPLAEGSNPNGQRRP- 668
              A       N G  ++L+KP     L+  L E +  R      P +    P     P 
Sbjct: 729 ISNAPSKVIARNAGVKRILAKPVAGYTLKTTLAEELAQRGREQAMPASLPGIPQALDLPG 788

Query: 669 --KILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDG 726
             ++L  +DN+ +  +++++L  L  +     NG  A+QA++ + +DLVLMD +MP +DG
Sbjct: 789 DFRVLVAEDNSISTKVIRSMLGKLNLKPDTACNGEEALQAMKAQHYDLVLMDCEMPILDG 848

Query: 727 RACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMK 786
            + T+Q+R WE        P+VALTAH +A  K     +GMD ++ KP+   QL +++  
Sbjct: 849 FSATQQLRAWEAENQRQRTPVVALTAHILAEHKERARLAGMDGHMAKPVELSQLRELIQY 908

Query: 787 W 787
           W
Sbjct: 909 W 909