Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 643 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  255 bits (651), Expect = 7e-72
 Identities = 186/558 (33%), Positives = 285/558 (51%), Gaps = 34/558 (6%)

Query: 7   IRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPAMARLAP 66
           I +R  +++L PA L+ L+L S+FT+++  DLR +L   G++IA QLAP +   +     
Sbjct: 9   IHTRTQIISLGPALLLTLLLISFFTFVRIQDLRQELNHTGQLIANQLAPASEYGVISGNN 68

Query: 67  AQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLLQRSGNDATRY 126
             LE +   TL    VR   FL    +R       ++ +  S  +  +  Q     A   
Sbjct: 69  EVLEGLMRATLSIPHVR---FLEVQDSR----NHILVYVEQSDESANRAQQVEVFQAPIR 121

Query: 127 LMPVFGHHRDLATDAV--PAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILACLALS 184
           L  +   +  L       PA  +  LG V + +S D    R    +  + +L L  L  +
Sbjct: 122 LQQIRLDNDFLQQGKATSPAIGDDYLGRVIVGMSDDAFSQRQQEIVIKAGILALFALLFT 181

Query: 185 GLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETLQNAH 244
            LLA R++ ++  PI  + HAV  ++ G     LP +   EL  LA  IN +A  L+ A 
Sbjct: 182 FLLARRLALSLAKPISDMGHAVKAIQQGEYNTPLPVVDDSELGHLARHINNLASALEQAS 241

Query: 245 EELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNGI 304
           +E + +I                   EL  AR+EA +A+R KS+FLA MSHE+RTP+NG+
Sbjct: 242 DEQKQAI------------------AELIQAREEAEQANRAKSDFLAMMSHELRTPMNGV 283

Query: 305 LGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDL 364
           LG   LL+ + ++  Q DY     +S  +LL +IN+ILDFS+IE   L L+ I FNL +L
Sbjct: 284 LGMLQLLETTPLSSEQADYTAVASESTGHLLKVINDILDFSRIERAALQLEHIDFNLGEL 343

Query: 365 IQDTLTILAPAAHAKQLEL-LSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIV 423
           I +++     +A  + L L L L        + GDP R++QIL NL+ NA+KFT  G + 
Sbjct: 344 ITNSVQSFQHSAQQRGLGLHLQLPAGIEQLQVNGDPTRIRQILLNLIGNALKFTERGQVQ 403

Query: 424 VRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLVISK 483
           V A  +        L  SV+DTGIG+    +  +F AF QAD+S++R+ GGTGLGL I++
Sbjct: 404 VDARWQVLDRQLIWLTCSVRDTGIGIDSDRLEMMFVAFQQADSSISRRYGGTGLGLSIAR 463

Query: 484 RLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLL------GRRAAIVDGH 537
            L E+MGG++  +S  G GS F + + L  A+     L P   +        +  +V+ +
Sbjct: 464 TLAERMGGKLRGESREGLGSTFTLEMPLALANPAPVPLTPPTTVRTTVPDNDQVLLVEDN 523

Query: 538 ELARQALEHQLEDCGLSV 555
            + R  +E  L   GL+V
Sbjct: 524 PVNRSVVEAMLRSLGLAV 541



 Score = 92.4 bits (228), Expect = 8e-23
 Identities = 47/119 (39%), Positives = 72/119 (60%), Gaps = 3/119 (2%)

Query: 669 KILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRA 728
           ++L V+DN  N  +V+ +L  LG  V    +G  AV+ V  + F  VLMD ++P +DG  
Sbjct: 516 QVLLVEDNPVNRSVVEAMLRSLGLAVCTAEDGLEAVELVGRQRFAAVLMDCRLPHLDGYE 575

Query: 729 CTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKW 787
            T +IR   N   G  LPI+ALTA+A+  ++   + +GMDDYL+KP+   +L QV+ +W
Sbjct: 576 ATRRIRQLPN---GAGLPIIALTANALQGDRERCMAAGMDDYLSKPLRRTELQQVLQRW 631