Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 785 a.a., Sensor histidine kinase/response regulator from Pseudomonas putida KT2440

 Score =  290 bits (742), Expect = 2e-82
 Identities = 212/653 (32%), Positives = 320/653 (49%), Gaps = 65/653 (9%)

Query: 162 TLLRGYRN--LFTSLLLILACLALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLP 219
           TLL G+    + T LLL L  + L+  L   +         + +    +   GH  + + 
Sbjct: 174 TLLNGFARSLVLTGLLLALFYMMLTKPLVTVIGALSGSDPRKPRQTRLECPHGHEHDEIG 233

Query: 220 TMG----------SHELDELAHGINRMAETLQNAHEELQHSIDQATEDVRQNLETIEIQN 269
            +           + E+++     NR+ + L     EL+  +   T +++ +  ++ + N
Sbjct: 234 VLVKVANQQFVSMATEIEQRRTAENRLTQYLN----ELEDIVSARTNELKASNSSLSLSN 289

Query: 270 IELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEK 329
            EL+ AR  AL+ ++ ++ FLANMSHEIRTPLNG+LG   L   + +   Q   L     
Sbjct: 290 QELEQARSRALDMAQARAAFLANMSHEIRTPLNGMLGMIALALDNPLPSEQRQQLAIAHD 349

Query: 330 SADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYR 389
           S   L+ ++N+ILD SK +AG+L L+ I F++  +++DT  +L+    A+ +EL  LI  
Sbjct: 350 SGKVLVELLNDILDLSKFDAGQLELERIAFDMGSMVEDTANLLSQNT-AQSVELTCLIAS 408

Query: 390 DTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGL 449
           D P+S++GDP R++QI++NL+SNA+KFTR G + VR            +R+ V+DTGIG+
Sbjct: 409 DFPSSVLGDPTRVRQIVSNLLSNALKFTRFGRVDVRLA-----AIVGGVRLEVRDTGIGI 463

Query: 450 SPQDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISL 509
                  +FQ F+QA   + RQ GGTGLGL +++ L + M G + + S PG GS F   L
Sbjct: 464 PEDAQARIFQPFTQAGAGITRQYGGTGLGLALTRNLCKAMQGHLHIRSEPGFGSCFTAEL 523

Query: 510 NLPKAHDDAEALPPQPLLGRRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQ 569
            L       EA+PP PL GR AA+        + L+H L   GL+     S   L+  V 
Sbjct: 524 PLTV---HTEAIPPAPLHGRVAALSAAGSGLNELLQHLLPAWGLTYQRHDSCATLVAAV- 579

Query: 570 AASQAGLPFEFAVLGANLGNLSPEQLGHYHQQLERYHCQCVVLCPTTEQALYHPYLPNGH 629
                            +  L  + + H       +  +  +  P      Y  +LPN  
Sbjct: 580 -----------------IDLLITDDVEHL------FELRPALKTPILLVTAYGNFLPNEQ 616

Query: 630 G------QLLSKPTCTRKLRRLLLELVQ---PRRPLAEGSNPNGQRRPKILCVDDNAANL 680
                    L++P     L + L   +Q   P  PLA  +    Q R +IL V+DN  N 
Sbjct: 617 SLALAPLHQLARPLARNALYQTLRRTLQGHEPEHPLAIPAITQEQGRARILLVEDNPVNQ 676

Query: 681 LLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQ 740
           L+ K +L  LG +V     G  A++ +  E FDLVLMD  MP MDG   + +IR     Q
Sbjct: 677 LVAKGMLAKLGCQVQLATQGAEALELLAREEFDLVLMDCNMPVMDGYEASRRIR-----Q 731

Query: 741 SGN--PLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQLAQVVMKWTGLS 791
           SG    LPIVALTA+AM  E+     +GM+DYL KP    +L  +V  W   S
Sbjct: 732 SGRWPELPIVALTANAMPEERERCRAAGMNDYLAKPFRREELLALVDHWVPFS 784