Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 917 a.a., response regulator from Pseudomonas sp. SVBP6

 Score = 1484 bits (3841), Expect = 0.0
 Identities = 771/918 (83%), Positives = 829/918 (90%), Gaps = 2/918 (0%)

Query: 1   MLDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPA 60
           ML+RLGIRSRVLLLALLPA LMALVLG YFTWLQQN+L+TQLLQRGKMIAEQLAPL APA
Sbjct: 1   MLNRLGIRSRVLLLALLPASLMALVLGGYFTWLQQNELQTQLLQRGKMIAEQLAPLVAPA 60

Query: 61  MARLAPAQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLLQRSG 120
           + R  PAQLERIAAQ LEQ+DVRAVAFL PDR  LAHAGPSMLN  P+GG GTQLLQR+G
Sbjct: 61  LVRHDPAQLERIAAQALEQSDVRAVAFLGPDRNALAHAGPSMLNQAPTGG-GTQLLQRTG 119

Query: 121 NDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILAC 180
           NDATRYL+PVFG HRDLA + +P EA+RLLGWVEIELSHDGTLLRGYR+LFTSLLLIL  
Sbjct: 120 NDATRYLLPVFGRHRDLAGELIPGEADRLLGWVEIELSHDGTLLRGYRSLFTSLLLILLG 179

Query: 181 LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETL 240
           LA + LLALRMSRTIN PI +IK+AV QLKDG+LEERLP MGS+ELDELA GINRMAETL
Sbjct: 180 LAATALLALRMSRTINGPIGQIKYAVTQLKDGNLEERLPQMGSYELDELAAGINRMAETL 239

Query: 241 QNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP 300
            NAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP
Sbjct: 240 HNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP 299

Query: 301 LNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFN 360
           LNGILGFTHLLQKSE+TPRQLDYL TIEKSA +LLGIINEILDFSKIEAGKLVLDSIPFN
Sbjct: 300 LNGILGFTHLLQKSELTPRQLDYLGTIEKSAGSLLGIINEILDFSKIEAGKLVLDSIPFN 359

Query: 361 LRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREG 420
           LRDLIQDTLTILAPAAHAKQLEL+SL+YRDTP SLVGDPLRLKQILTNLVSNAIKFTREG
Sbjct: 360 LRDLIQDTLTILAPAAHAKQLELVSLVYRDTPLSLVGDPLRLKQILTNLVSNAIKFTREG 419

Query: 421 TIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLV 480
           TIV RAMLEDE ED  QLRISVQDTGIGLS QDVR LFQAFSQADNSL+RQPGGTGLGLV
Sbjct: 420 TIVARAMLEDEREDSVQLRISVQDTGIGLSNQDVRALFQAFSQADNSLSRQPGGTGLGLV 479

Query: 481 ISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLLGRRAAIVDGHELA 540
           ISKRLIEQMGGEIGVDSTPGEGSQFWISL+LPKA DDAE LP QPL+GRR AIVD HELA
Sbjct: 480 ISKRLIEQMGGEIGVDSTPGEGSQFWISLSLPKARDDAEDLPMQPLVGRRVAIVDSHELA 539

Query: 541 RQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQLGHYHQ 600
           RQALEHQLEDCGLSVSLFA+ +QLL  V+AA+ AG PFE AVLG NL +LSPE+LG + Q
Sbjct: 540 RQALEHQLEDCGLSVSLFATVEQLLHAVEAATLAGQPFELAVLGVNLDSLSPERLGQHIQ 599

Query: 601 QLERYHCQCVVLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLELVQPRRPLAEGS 660
           QLE   CQ +VLCPTTEQALYHPYLPN H QL +KP CTRKLRR L+E+VQPRRP +E  
Sbjct: 600 QLEHLACQALVLCPTTEQALYHPYLPNPHSQLQAKPACTRKLRRALMEMVQPRRPGSESK 659

Query: 661 NPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQ 720
             + Q  PK+LCVDDN ANLLLV+TLLEDLGAEVLAV++GYAAVQAVQ+E FDLVLMDVQ
Sbjct: 660 PVSDQPLPKVLCVDDNPANLLLVQTLLEDLGAEVLAVDSGYAAVQAVQDERFDLVLMDVQ 719

Query: 721 MPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQL 780
           MPGMDGR CTEQIR WE++QSG PLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQL
Sbjct: 720 MPGMDGRECTEQIRQWESSQSGAPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQL 779

Query: 781 AQVVMKWTGLSLGTPQ-QAQAELLTNGDELKVLDPEEGLRLAAGKADLAADMLSMLLASL 839
           AQVV+KWTGL+LG P+ +   E + +  ELKVLDPEEGLRLAAGK DLAADML+MLLASL
Sbjct: 780 AQVVLKWTGLTLGAPRPERLLERIPDSSELKVLDPEEGLRLAAGKPDLAADMLAMLLASL 839

Query: 840 DTDREAIRAARAADDRNGLIEQVHRLNGASRYCGVPQLRAACQRSETLLKQDNPQAQQAL 899
           ++DREAIR AR A DRNG+IE+VHRLNGASRYCGVPQLRAACQRSETLLKQD+PQA QAL
Sbjct: 840 ESDREAIRTAREAADRNGMIERVHRLNGASRYCGVPQLRAACQRSETLLKQDDPQAPQAL 899

Query: 900 DELDSAISRLAAQARLSA 917
           DELD AI+RL AQAR+SA
Sbjct: 900 DELDRAITRLTAQARMSA 917