Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 917 a.a., Signal transduction histidine-protein kinase BarA from Pseudomonas sp. S08-1

 Score = 1236 bits (3197), Expect = 0.0
 Identities = 650/918 (70%), Positives = 740/918 (80%), Gaps = 2/918 (0%)

Query: 1   MLDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPA 60
           M   LGI+ RVLLL LLP  L+ALVLG YFTW+Q  DLR+QL QRG+   + LAPLAA A
Sbjct: 1   MFKDLGIKGRVLLLTLLPTSLLALVLGGYFTWMQLADLRSQLQQRGETAVQHLAPLAAQA 60

Query: 61  MARLAPAQLERIAAQTLEQADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLLQRSG 120
           +AR   AQLER+A + L Q DVRAV FL+ +R  LA AGP MLN PP   T   L   S 
Sbjct: 61  LARGDAAQLERLAEEALNQQDVRAVGFLSAERQSLAQAGPDMLNPPPQA-TVEPLATSSS 119

Query: 121 NDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILAC 180
            DATR+LMPVFG H+ LA       A+RLLGWVE+ELSH  TLL+GYR+LF SLLLI+A 
Sbjct: 120 QDATRFLMPVFGRHQSLAGPTEADSADRLLGWVELELSHHRTLLQGYRSLFASLLLIVAG 179

Query: 181 LALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETL 240
           L ++ LLALRMSR INDP+  IK  V QLKDG LE RLP +G+HE+DELA GINRMAE+L
Sbjct: 180 LTVTALLALRMSRAINDPLRTIKQGVIQLKDGQLETRLPPLGNHEMDELAAGINRMAESL 239

Query: 241 QNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTP 300
           QNA EELQHSIDQATEDVRQNLETIEIQNIELD+ARKEALEASRIKSEFLANMSHEIRTP
Sbjct: 240 QNAQEELQHSIDQATEDVRQNLETIEIQNIELDLARKEALEASRIKSEFLANMSHEIRTP 299

Query: 301 LNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFN 360
           LNGILGFT LLQKS++TPRQ DYL TIEKSA++LLGIINE+LDFSKIEAGKLVL++IPFN
Sbjct: 300 LNGILGFTGLLQKSDLTPRQQDYLGTIEKSAESLLGIINEVLDFSKIEAGKLVLENIPFN 359

Query: 361 LRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREG 420
           LRDLIQD LTILAP+AH KQLEL+SLIYRDTP SL GDP RLKQ+LTNLVSNAIKFTREG
Sbjct: 360 LRDLIQDCLTILAPSAHQKQLELVSLIYRDTPLSLQGDPQRLKQVLTNLVSNAIKFTREG 419

Query: 421 TIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLV 480
           TI VRAM+EDE +D AQLRISVQDTG+GLS +D+R LFQAFSQADNSL+RQ GGTGLGLV
Sbjct: 420 TIAVRAMVEDESDDRAQLRISVQDTGVGLSDEDLRALFQAFSQADNSLSRQAGGTGLGLV 479

Query: 481 ISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLLGRRAAIVDGHELA 540
           ISKRLIEQMGGEIGVDS PG GS+FWISL LPKA DD + LP  PL GRR A+++ H+L 
Sbjct: 480 ISKRLIEQMGGEIGVDSNPGTGSEFWISLTLPKARDDGDDLPRAPLQGRRVAMLENHQLT 539

Query: 541 RQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLGNLSPEQLGHYHQ 600
           RQAL+HQLEDC L V  FAS DQLL+ V    +AG P + AVLG N+  L PEQLG    
Sbjct: 540 RQALQHQLEDCNLQVLEFASLDQLLEQVARQREAGQPIDLAVLGVNVHELPPEQLGQRLW 599

Query: 601 QLERYHCQCVVLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLELVQPRRPLAEGS 660
            L+R  C+ +VLCPTTEQALYH  LP  H QL +KP CTRKL R L EL+ PR+  +E  
Sbjct: 600 DLDRLGCKALVLCPTTEQALYHEALPETHLQLQAKPACTRKLLRALSELINPRQVKSEAP 659

Query: 661 NPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAVQEELFDLVLMDVQ 720
            P   R P++LCVDDN ANLLLV+TLL D+GAEV+AV++GYAAV+AVQ++ FDLV MDVQ
Sbjct: 660 APLTSRAPRLLCVDDNPANLLLVQTLLGDMGAEVVAVDSGYAAVEAVQKQSFDLVFMDVQ 719

Query: 721 MPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLHSGMDDYLTKPISERQL 780
           MPGMDGR  TE IR WE  +  +PLPIVALTAHA+ANEKRALL  GMDDYLTKPI+ERQL
Sbjct: 720 MPGMDGRQATEAIRQWEQERECSPLPIVALTAHALANEKRALLQGGMDDYLTKPINERQL 779

Query: 781 AQVVMKWTGLSL-GTPQQAQAELLTNGDELKVLDPEEGLRLAAGKADLAADMLSMLLASL 839
           AQVV+KWTGL+L    Q A +        L+VLD EEGLRLAAGKADLA+DMLSMLLA L
Sbjct: 780 AQVVLKWTGLALRNHSQPAASATAAISASLRVLDAEEGLRLAAGKADLASDMLSMLLAGL 839

Query: 840 DTDREAIRAARAADDRNGLIEQVHRLNGASRYCGVPQLRAACQRSETLLKQDNPQAQQAL 899
             DR+AIR AR + +RN LIE+VHRL+GA+RYCGVPQLRAACQRSETLLKQD+P AQ AL
Sbjct: 840 PADRQAIRQARDSGERNALIERVHRLHGATRYCGVPQLRAACQRSETLLKQDDPNAQNAL 899

Query: 900 DELDSAISRLAAQARLSA 917
           DELD+AI+RLA +A +SA
Sbjct: 900 DELDAAIARLAEEAAISA 917