Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 947 a.a., Signal transduction histidine kinase from Kangiella aquimarina DSM 16071

 Score =  586 bits (1510), Expect = e-171
 Identities = 364/928 (39%), Positives = 540/928 (58%), Gaps = 41/928 (4%)

Query: 6   GIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPAMARLA 65
           GI  R++ LAL P  L+AL+LG+ F     ND +  L  RGK IA  LA  +   +  L 
Sbjct: 5   GISKRIMTLALTPTILVALLLGTLFISNHINDSKYSLTARGKTIATHLALASEYGLITLD 64

Query: 66  PAQLERIAAQTLEQ-ADVRAVAFLAPDRTRLAHAGPSMLNLPPSGGTGTQLLQRSG--ND 122
              L  +A    +   D+ AVA    +   LA  G S   L          L RSG  N+
Sbjct: 65  EKNLAEMAQAARDNDKDLMAVAIFDQNNRVLASVG-SAETLSVMSIDNPYSLARSGSSNN 123

Query: 123 ATRYLMPVFGHHRDLATDAV----PAEAE----------RLLGWVEIELSHDGTLLRGYR 168
             R+          L    +    P   E          +LLG+V + ++ + + +  Y 
Sbjct: 124 LMRFARTAESEQGKLFYAPIISKFPETYESWQNYSQANAQLLGYVAVMMTDEFSAISRYN 183

Query: 169 NLFTSLLLILACLALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDE 228
            + T+L + L  L + G LA RMS ++  PIE++   +N++KDG L+ R+ +  + EL  
Sbjct: 184 TILTTLFITLIGLLIGGFLARRMSMSVTTPIEKMVEGINRIKDGRLDTRIESEANAELLT 243

Query: 229 LAHGINRMAETLQNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSE 288
           L  GIN MAE +++  +E+Q ++DQATED+R+ LET+E+ N+ELD+AR++ALEASR+K+E
Sbjct: 244 LQEGINLMAENMEHNQDEMQLAVDQATEDLRETLETLEVNNLELDIARRQALEASRVKTE 303

Query: 289 FLANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIE 348
           FLANMSHEIRTP+NG++GFT LL K+E+  +Q D+L  I++SA +LL II++ILD+SKIE
Sbjct: 304 FLANMSHEIRTPMNGVIGFTELLLKTELNNKQKDFLFDIKRSATSLLSIIDDILDYSKIE 363

Query: 349 AGKLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTN 408
           AGK+  +  PF+LR+ + D   +L P A+ K +EL+SLIY D P +L+GDP+R+KQI+TN
Sbjct: 364 AGKMSFERYPFDLRECVDDIFRMLGPNANKKGIELVSLIYSDVPKALLGDPIRIKQIITN 423

Query: 409 LVSNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSL 468
           LV+NAIKFT+ G++ + A +E E++   +L+I V+D+GIGL+ +  R LF+AFSQAD+S 
Sbjct: 424 LVNNAIKFTKSGSVELYAEVESENKKGLKLKIQVKDSGIGLTQEQQRNLFKAFSQADSST 483

Query: 469 ARQPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQPLLG 528
            R+ GGTGLGLVISK L+E+MGG IGV+S  GEGS FW +L   +     +ALP   L G
Sbjct: 484 KREFGGTGLGLVISKSLVEKMGGNIGVNSNQGEGSTFWFTLQCER----TDALPEDGLTG 539

Query: 529 -----RRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVL 583
                +   + D H   R ++   LE+ G+ V  F   D L+  +   SQ+G   E  ++
Sbjct: 540 EFLANKSVLVFDPHPSTRLSITQILEEWGMLVRSFEKIDDLMTEIDLYSQSGKSIELIII 599

Query: 584 GANLGNLSPEQLGHYHQQLERYHCQCVVLCPTTEQALYHPYLPN-GHGQLLSKPTCTRKL 642
           G        +QL +   + +      ++   T   A +  +L + G  + ++KP   R L
Sbjct: 600 GGQRFRRRQQQLEYICNKAQTQLYCPIITFTTAGNADFLEHLHSIGVNRAMTKPVTHRAL 659

Query: 643 RRLLLELVQP------RRPL-AEGSNPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVL 695
              L+EL++       + P  A   + +  +   +L VDDN ANL LV TLL+DL  +V 
Sbjct: 660 YNSLIELLKTPSIHSGKEPAEAPVGDASLLKDIYVLAVDDNPANLRLVTTLLQDLNIKVD 719

Query: 696 AVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAM 755
           A  +G  AV   + +++D +LMD+QMP MDG   T  IR     ++    PI+ALTAHAM
Sbjct: 720 AAESGMQAVSLSKNKVYDAILMDIQMPEMDGLEATRTIRA---NRTNLNTPIIALTAHAM 776

Query: 756 ANEKRALLHSGMDDYLTKPISERQLAQVVMKWT-GLSLGTPQQAQAELLTNGDELKVLDP 814
           A+E+  LL +GMDDY+TKP+SE+ L  +++KWT   S   P     + + + +  + LD 
Sbjct: 777 ASEREQLLEAGMDDYMTKPVSEQALVNLLLKWTQAASDINPTPTVQQEIEDENRNQSLDW 836

Query: 815 EEGLRLAAGKADLAADMLSMLL-ASLDTDREAIRAARAADDRNGLIEQVHRLNGASRYCG 873
              L+LA     LA DML ML+ ++ DT R  I AA  + D + L++ VH+L+GAS Y G
Sbjct: 837 SLSLKLANNNEQLAIDMLKMLVDSNFDTGRN-IHAAYQSQDFDQLLQHVHKLHGASCYVG 895

Query: 874 VPQLRAACQRSETLLKQDNPQAQQALDE 901
            P+L+      ETLLK+      + L E
Sbjct: 896 TPKLKHLSNVYETLLKKQQYNKLEELHE 923