Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 924 a.a., two-component sensor histidine kinase BarA from Erwinia amylovora T8

 Score =  516 bits (1330), Expect = e-150
 Identities = 338/934 (36%), Positives = 519/934 (55%), Gaps = 50/934 (5%)

Query: 1   MLDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPA 60
           ++ +  +R+R+++L L P  ++ L+L ++F   + N+L++QL   G  I E LA  +   
Sbjct: 15  IMTKYSLRARMMILILAPTLMIGLLLSTFFVVNRYNELQSQLTDAGVNIIEPLAVSSEYG 74

Query: 61  MARLAPAQLERIAAQTLEQ-ADVRAVAFLAPDRTRLA-----HAGPSMLNLPPSGG-TGT 113
           M   +   + ++ +    + +D+     +  D  +L      H  P +L LP +   T  
Sbjct: 75  MTFHSRESVRQLVSLLHRRHSDIVRAISVFDDHNQLFVTSNYHQAPDLLRLPDNLPLTSR 134

Query: 114 QLLQRSGNDA---TRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNL 170
            + QR GN     T  L   +        DA P      LG+V IEL      L+ Y+ +
Sbjct: 135 TMKQRHGNSVILRTPILSESYYPDESPGQDAKPNGNP--LGYVAIELDLQSVRLQQYKEV 192

Query: 171 FTSLLLILACLALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELA 230
           F S LL+L CL ++ L A R+ R +  PI  +   V++++ G L+ R+      ELD L 
Sbjct: 193 FISTLLLLLCLCIAMLFAYRLMRDVTGPIRNMVSTVDRIRRGQLDSRVEGYMLGELDVLK 252

Query: 231 HGINRMAETLQNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFL 290
           +GIN MA +L   HEE+Q +IDQAT D+R+ LE +EIQN+ELDMA+K A EA+RIKSEFL
Sbjct: 253 NGINSMAMSLTAYHEEMQQNIDQATSDLRETLEQMEIQNVELDMAKKRAQEAARIKSEFL 312

Query: 291 ANMSHEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAG 350
           ANMSHE+RTPLNG++GFT    K+ +   Q DYL+TIE+SA+NLL IIN++LDFSK+EAG
Sbjct: 313 ANMSHELRTPLNGVIGFTRQTLKTTLNSTQRDYLHTIERSANNLLSIINDVLDFSKLEAG 372

Query: 351 KLVLDSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLV 410
           KLVL++IPF LR  + + + +LA +AH K LEL   I  D P + +GDPLR++QI+ NL+
Sbjct: 373 KLVLETIPFPLRATLDEVVVLLAQSAHEKGLELTLNIQSDVPDNAIGDPLRMQQIIVNLL 432

Query: 411 SNAIKFTREGTIVVRAMLEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLAR 470
            NAIKFT  G I +R        +  +L + + DTGIG+S +    LFQAF QAD S++R
Sbjct: 433 GNAIKFTESGNIDIRVEKRALSNNRMELEVQIHDTGIGISEKQQSQLFQAFRQADASISR 492

Query: 471 QPGGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNL---PKAHDDAEALPPQPLL 527
           + GGTGLGLVI+++L+ +MGGEI   S    GS FW  +NL   P A  D   +    + 
Sbjct: 493 RHGGTGLGLVITQKLVNEMGGEISFHSRLHRGSTFWFHINLALNPNAASDPRIM--DCVE 550

Query: 528 GRRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANL 587
           G+  A V+ +  A +A+   L    + VS  +S D+L Q        GLP    V   + 
Sbjct: 551 GQHLAYVEPNAAAAKAVMEMLNATPMRVSYSSSLDELAQDRYDVLLMGLP----VAQGHR 606

Query: 588 GNLSPEQLGHYHQQLERYHCQCVVLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLL 647
             +  +QL    Q+        ++  P   Q         G    L KP    +L  +L+
Sbjct: 607 LEIDEQQLTPILQRAN----SVIMALPFQMQIYAEDLKARGVTACLIKPLSMTRLLPVLV 662

Query: 648 ELVQPRRPLAEGSNPNGQRR---PKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAV 704
           +             P  +R     +++ VDDN ANL L+  LLE+  A+++  ++G AA+
Sbjct: 663 D-----HHYRRDMQPQAERTLLPLRVMAVDDNPANLKLIGALLEEQVADIVLCDSGEAAI 717

Query: 705 QAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAMANEKRALLH 764
              + +  D++LMD+QMP +DG   +E IR  +  Q  N  PIVA+TAHAM  E++ L+ 
Sbjct: 718 GQARLQHLDIILMDIQMPEIDGIRASELIR--QLPQHIN-TPIVAVTAHAMDGERQQLMK 774

Query: 765 SGMDDYLTKPISERQLAQVVMKWTGLSLGTPQQAQAELLTNGDELKVLDPEEGLRLAAGK 824
           +GM+DYL KPI E++L++++ +++ +        Q  L +  +    LD    L  AA K
Sbjct: 775 AGMNDYLAKPIDEQKLSRLLARYSPV-------GQRVLPSVTEVPASLDWAMALSQAANK 827

Query: 825 ADLAADMLSMLLASLDTDREAIRAARAADDRNGLIEQVHRLNGASRYCGVPQLRAACQRS 884
            DLA D+L ML+  L   ++ +    A ++ + L   +H+L+G++ Y GVP+++  C + 
Sbjct: 828 PDLARDLLQMLVDFLPEVQKLVELYSAENNTSALRNIIHKLHGSASYSGVPRMKQLCLQL 887

Query: 885 ETLLKQ------DNPQAQQALDELDSAISRLAAQ 912
           E  L+Q        P+  + LDE+ + ++RLA +
Sbjct: 888 EQNLRQSEDIAASEPELLELLDEMHN-VARLAKE 920