Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 921 a.a., two-component sensor histidine kinase BarA from Dickeya dianthicola ME23

 Score =  532 bits (1371), Expect = e-155
 Identities = 343/928 (36%), Positives = 512/928 (55%), Gaps = 58/928 (6%)

Query: 2   LDRLGIRSRVLLLALLPAGLMALVLGSYFTWLQQNDLRTQLLQRGKMIAEQLAPLAAPAM 61
           + +  +R+R+++L L PA L+ L+L S+F   + N L+ QL   G  I + LA  +A A+
Sbjct: 1   MTKYSLRARMMILILAPAMLIGLLLSSFFVIHRYNQLQEQLADAGASIIQPLAVNSAYAL 60

Query: 62  ARLAPAQLERIAAQTLEQAD--VRAVAFLAPDRTRLAHAGPS-----MLNLPPSGGTGTQ 114
            +  P  L ++           VR ++        +  + P+     +L +P      T 
Sbjct: 61  TQRQPESLRQLVNMLHRHHSGIVRTISVFDARNQLIVTSNPNNPHGQLLQVPSGNPLPTA 120

Query: 115 LLQRSGNDATRYLMPVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSL 174
           L  ++  +     MP+       A+  +  +A   +G+V +EL  +   L+ YR +F + 
Sbjct: 121 LRMQNEGECLVLQMPIENEGDVSASTLISRQAP--MGYVAVELDLNTIRLQQYREMFMAA 178

Query: 175 LLILACLALSGLLALRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGIN 234
           +L+L C+ ++ LLA R+ R +  PI  +   V++++ G L+ R+      ELD L +GIN
Sbjct: 179 MLLLFCMGVAMLLAYRLMRDVTIPIRNMVETVDRIRRGQLDSRVEGHMLGELDMLKNGIN 238

Query: 235 RMAETLQNAHEELQHSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMS 294
            MA +L   HEE+Q +IDQAT D+R+ LE +EIQN+ELD+A+K A EA+RIKSEFLANMS
Sbjct: 239 SMAMSLTAYHEEMQQNIDQATYDLRETLEQMEIQNVELDLAKKRAQEAARIKSEFLANMS 298

Query: 295 HEIRTPLNGILGFTHLLQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVL 354
           HE+RTPLNG++GFT    K+++T  Q DYL TIE+SA+NLL IIN++LDFSK+EAGKLVL
Sbjct: 299 HELRTPLNGVIGFTRQTLKTQLTSTQKDYLQTIERSANNLLNIINDVLDFSKLEAGKLVL 358

Query: 355 DSIPFNLRDLIQDTLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAI 414
           ++IPF+L + + + + +LA  AH K LEL   I  D P   VGDPLRL+QI+TNL+ NAI
Sbjct: 359 ENIPFSLHNTLDEVIMLLAHTAHEKGLELTLNIQHDVPEQFVGDPLRLQQIITNLLGNAI 418

Query: 415 KFTREGTIVVRAMLEDEHEDCAQ--LRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQP 472
           KFT +G I +R  +E   ++  Q  L I ++DTGIG++      LFQAF QAD S++RQ 
Sbjct: 419 KFTEQGNIDIR--IEKRRQESVQVLLEIQIKDTGIGIAEAQQTQLFQAFRQADTSISRQH 476

Query: 473 GGTGLGLVISKRLIEQMGGEIGVDSTPGEGSQFWISLNLPKAHDDAEALPPQ----PLLG 528
           GGTGLGLVI++RL+ +MGG+I   S   +G+ FW ++NL     +   L P      L G
Sbjct: 477 GGTGLGLVITQRLVREMGGDISFHSKLNQGTTFWCTVNLQL---NPHVLEPDYHFARLQG 533

Query: 529 RRAAIVDGHELARQALEHQLEDCGLSVSLFASYDQLLQGVQAASQAGLPFEFAVLGANLG 588
           +  A V+ +  A QA    L    L+VS   + +QL +        G+P  +      L 
Sbjct: 534 KHLAYVEANPAAAQATLDILVHTPLTVSYSPTLEQLPERTFDILLIGIPIHYR---NTLL 590

Query: 589 NLSPEQLGHYHQQLERYHCQ---CVVLC-PTTEQALYHPYLPNGHGQLLSKPTCTRKLRR 644
           + +P         L R  C+   CV+L  P+  +         G    LSKP    +   
Sbjct: 591 DFTP---------LIRDFCRLASCVILALPSMAEMEAEQLKSFGIHASLSKPITAPR--- 638

Query: 645 LLLELVQPRRPLAEGSNPNGQRRP---------KILCVDDNAANLLLVKTLLEDLGAEVL 695
            LL ++Q     ++  +      P          ++ VDDN ANL L+  LLE+    ++
Sbjct: 639 -LLTMLQDNNLFSQDGSERALPPPAVSLSLLPLSVMAVDDNPANLKLIGALLEEQVENII 697

Query: 696 AVNNGYAAVQAVQEELFDLVLMDVQMPGMDGRACTEQIRLWENTQSGNPLPIVALTAHAM 755
              +G  A+   Q    D++LMD+QMPGMDG   +E IR           PIVA+TAH M
Sbjct: 698 LCESGADAIARAQGTHLDIILMDIQMPGMDGLQASEHIR---QLPQHAHTPIVAVTAHTM 754

Query: 756 ANEKRALLHSGMDDYLTKPISERQLAQVVMKWTGLSLGTPQQAQAELLTNGDELKVLDPE 815
           + E+ ALL SGMDDYL+KPI E+ L Q +++    +           +T    L  LD +
Sbjct: 755 SGEREALLQSGMDDYLSKPIDEQMLRQTLLRHACKTPSNLPALPPPAVTVQSPLS-LDWD 813

Query: 816 EGLRLAAGKADLAADMLSMLLASLDTDREAIRAARAADDRNGLIEQVHRLNGASRYCGVP 875
             LR AA K DLA D+L+MLL  L   R+ + A  A +    +++ +H+L+G+  Y GVP
Sbjct: 814 LALRQAASKPDLARDLLAMLLDFLPDVRQQVSAVLAGNPPGNMVDIIHKLHGSCSYSGVP 873

Query: 876 QLRAACQRSETLLKQDNPQAQQALDELD 903
           +L+  C   E  L++  P     +DEL+
Sbjct: 874 RLKQICHYLEQSLRKGLP-----VDELE 896