Pairwise Alignments

Query, 917 a.a., Sensor protein GacS from Pseudomonas putida KT2440

Subject, 934 a.a., Signal transduction histidine-protein kinase BarA from Acinetobacter radioresistens SK82

 Score =  397 bits (1020), Expect = e-114
 Identities = 288/815 (35%), Positives = 418/815 (51%), Gaps = 48/815 (5%)

Query: 129 PVFGHHRDLATDAVPAEAERLLGWVEIELSHDGTLLRGYRNLFTSLLLILACLALSGLLA 188
           PV  HH  L    + ++      W+ IE+ +    +  YR +   +   L  L L  L  
Sbjct: 133 PVSYHHNHLYGLQISSDPANK-AWLVIEMDNQPLEIARYRVMIVLIATGLLTLLLLLLCL 191

Query: 189 LRMSRTINDPIERIKHAVNQLKDGHLEERLPTMGSHELDELAHGINRMAETLQNAHEELQ 248
              SR    P+  I+  + +L    L++ +    + EL  L   I  + + L  +  EL+
Sbjct: 192 NFYSRRWIAPMYEIRMQLQRLNVDTLDQHIIINSTGELRLLQRDIANVVKRLHFSFLELK 251

Query: 249 HSIDQATEDVRQNLETIEIQNIELDMARKEALEASRIKSEFLANMSHEIRTPLNGILGFT 308
              +Q  +D+R+ L+T+E+QNI    AR +A+ A++ KS FLAN+SHE+RTPLN I GF 
Sbjct: 252 EHTEQTEDDLRRTLDTLEVQNITYRQARDQAISANQAKSVFLANISHELRTPLNSIDGFI 311

Query: 309 HL-LQKSEMTPRQLDYLNTIEKSADNLLGIINEILDFSKIEAGKLVLDSIPFNLRDLIQD 367
           HL L++  ++  Q  YL TI KS+ +LL +IN++LDFSKI+AGKL L++ PF+L + I D
Sbjct: 312 HLMLRQDNLSNEQNLYLQTIRKSSAHLLALINDVLDFSKIDAGKLELETAPFDLEEAIFD 371

Query: 368 TLTILAPAAHAKQLELLSLIYRDTPASLVGDPLRLKQILTNLVSNAIKFTREGTIVVRAM 427
            + +L+P A  KQ+++      D P  +VGD LR KQILTNL+SNAIKFT +G I+VRA 
Sbjct: 372 VMDMLSPLAAQKQIDMAFYYGDDVPQYIVGDVLRFKQILTNLISNAIKFTPDGEIIVRAR 431

Query: 428 LEDEHEDCAQLRISVQDTGIGLSPQDVRTLFQAFSQADNSLARQPGGTGLGLVISKRLIE 487
           +E +  +   L  SVQD+GIGLS  D + LF++FSQ D S+ RQ GGTGLGL ISK+L+ 
Sbjct: 432 MEQDGMEQCLLHFSVQDSGIGLSGTDRKKLFESFSQGDTSVTRQFGGTGLGLAISKQLVH 491

Query: 488 QMGGEIGVDS----TPGE-GSQFWISLNLPKAHDDAEALPPQPLLGRRAAIVDGHELARQ 542
            M G+IG +      P E GS FW +       +  +  P    +   + +   H     
Sbjct: 492 LMQGQIGFEDNQERAPTEKGSTFWFTAMFGVEDEHEQQHPNFEHIHVLSFL--AHPATAN 549

Query: 543 ALEHQLEDCGLSVSLFASYDQLLQGV-QAASQAGLPFEFAVLGANLGNLSPEQLGHYHQQ 601
            L H LE+  +  +   S   L   + Q   Q+   +       +   L  E    Y   
Sbjct: 550 VLRHYLENYQVKHTETQSILDLFSRLNQLKDQSENTWLIVDHSGDSEALLKEIRSRYSGH 609

Query: 602 LERYHCQCV----VLCPTTEQALYHPYLPNGHGQLLSKPTCTRKLRRLLLELVQPRRPLA 657
           L  Y  Q V    +L     + LY P       QLLS                QP     
Sbjct: 610 LAVYGYQMVLEPNILTEYRARPLYQPLSRTALIQLLSN---------------QPVFEQD 654

Query: 658 EGSNPNGQRRPKILCVDDNAANLLLVKTLLEDLGAEVLAVNNGYAAVQAV------QEEL 711
              + NG R   IL VDD+  NL++++ LL +L        +G  A+  +      +E+L
Sbjct: 655 SLESFNG-RGLHILAVDDHLPNLIVLEALLGELNVTTTKALSGQEALDILHHQIERKEKL 713

Query: 712 FDLVLMDVQMPGMDGRACTEQIRLWENTQSGN-PLPIVALTAHAMANEKRALLHSGMDDY 770
           FDL+ MD+QMP M G   T  IR  E+T  G   LPI+ALTAHA+A+EK  LL  GMDDY
Sbjct: 714 FDLIFMDIQMPVMSGIDTTRAIRSLESTLEGEVHLPIIALTAHALADEKNKLLKVGMDDY 773

Query: 771 LTKPISERQLAQVVMKWTGLSLGTPQQAQAELLTNGDELKVLDPEEGLRLAAGKADLAAD 830
           +TKPI   QL  ++ +WT      P   ++ +L +  + +VLD ++ L+LAA K DLA D
Sbjct: 774 VTKPIQIDQLIHILTQWTNNQFNQPPAIESGILLDALDPEVLDWQQSLQLAANKEDLAHD 833

Query: 831 MLSMLLASLDTDREAIRAARAADDRNGLIEQVHRLNGASRYCGVPQLRAACQRSETLL-- 888
           +L ML+ S   +   ++     +D   L   +HRL GA+RY G P+L+      E  +  
Sbjct: 834 LLKMLVDSFPAELAEMQQLIELEDFPQLEHVLHRLYGATRYVGTPKLQETSGSFEQFVST 893

Query: 889 ------KQDNPQAQQAL---DELDSAISRLAAQAR 914
                 K D    Q+ L   DEL + I  +   AR
Sbjct: 894 LRKECRKADEAFIQETLNRFDELTAIIHEVETAAR 928